Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P03
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3J9 Cluster: Putative uncharacterized protein PFE132...    35   1.8  
UniRef50_Q6NHX7 Cluster: Putative ABC transport system, ATP-bind...    34   3.2  
UniRef50_Q59MQ9 Cluster: Potential fungal zinc cluster transcrip...    33   7.3  
UniRef50_Q5UP66 Cluster: Putative ankyrin repeat protein R597; n...    33   7.3  
UniRef50_A0C8A3 Cluster: Chromosome undetermined scaffold_157, w...    33   9.7  

>UniRef50_Q8I3J9 Cluster: Putative uncharacterized protein PFE1325w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFE1325w - Plasmodium falciparum (isolate 3D7)
          Length = 4524

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 63   KIVQSNLKIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHMLFYLPMFIYYLFTVQ*YK 242
            K V++NLK K+ A+++   NN    +  +N + ++ YST  ++ Y+    Y L T++  K
Sbjct: 3963 KEVKNNLKRKSDANKKNK-NNKKNNKVKYNKMKKNMYSTNLIIHYVFSKFYRLHTIKFKK 4021

Query: 243  TM-KLLKINWFSNENLLNI 296
             + K  K++      L NI
Sbjct: 4022 FLRKFKKVSMTKKSTLSNI 4040


>UniRef50_Q6NHX7 Cluster: Putative ABC transport system, ATP-binding
            protein; n=1; Corynebacterium diphtheriae|Rep: Putative
            ABC transport system, ATP-binding protein -
            Corynebacterium diphtheriae
          Length = 1246

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 394  NGGTEFVFHNIKFSVSHDQPAVKD 323
            N GT+  FHN+ FS SHD  AV D
Sbjct: 999  NEGTDITFHNVGFSYSHDSAAVID 1022


>UniRef50_Q59MQ9 Cluster: Potential fungal zinc cluster
           transcription factor; n=2; Saccharomycetales|Rep:
           Potential fungal zinc cluster transcription factor -
           Candida albicans (Yeast)
          Length = 1078

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 137 SLIIQLHYALPXFNGTH-AVLFTNVYLLFIYCTIIQNNE 250
           S+I  L+  LP FNG H ++     YLLF+Y +++ NN+
Sbjct: 373 SIIKSLYDFLPYFNGFHISIGQLQTYLLFLYYSLLTNNK 411


>UniRef50_Q5UP66 Cluster: Putative ankyrin repeat protein R597; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Putative ankyrin
           repeat protein R597 - Mimivirus
          Length = 274

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -1

Query: 301 LKILSRFSFENQFIFNNFIVLYYCTVN 221
           LKI+SR+ FEN++I+NN  ++ Y   N
Sbjct: 142 LKIISRYHFENKYIYNNHEIVKYMIDN 168


>UniRef50_A0C8A3 Cluster: Chromosome undetermined scaffold_157,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_157,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 331

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = -1

Query: 406 ISGSNGGTEFVFHNIKFSVSHDQPAVKDK--PE--SSRLLKILSRFSFENQFI-FNNFIV 242
           I G N G +   +NI+      +P +K    PE  +     +LS FSF+NQF+ FNN  +
Sbjct: 261 IFGLNKGRKQTHYNIRRVHQSIKPQIKTNFMPELPNFNFSNVLSYFSFQNQFVDFNNENI 320

Query: 241 LYYCTV 224
           + Y  +
Sbjct: 321 MAYSNI 326


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,011,697
Number of Sequences: 1657284
Number of extensions: 12177151
Number of successful extensions: 23591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23583
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)