Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P03
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.98 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   1.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   4.0  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   4.0  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   4.0  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   4.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   6.9  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 647 NPTSNL*VSLVQHELHVSSVL 585
           NP S+L  SL  H  H+SS L
Sbjct: 274 NPNSSLQPSLASHHSHLSSAL 294


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -3

Query: 485 FRNLCITTSFFRLCLKLYIYYCHFREYFRFKWW 387
           F  +C T S   LC      Y H ++  R+  W
Sbjct: 104 FDVMCSTASILNLCAISLDRYIHIKDPLRYGRW 136


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHML--FYLPMFIYY 218
           KI +S S  T  NNN KY    N+  +  Y   + +    +P+ +YY
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHML--FYLPMFIYY 218
           KI +S S  T  NNN KY    N+  +  Y   + +    +P+ +YY
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHML--FYLPMFIYY 218
           KI +S S  T  NNN KY    N+  +  Y   + +    +P+ +YY
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHML--FYLPMFIYY 218
           KI +S S  T  NNN KY    N+  +  Y   + +    +P+ +YY
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHMLFY 197
           KI +S S  T  NNN KY    N+   + Y+ +  L+Y
Sbjct: 79  KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKK--LYY 114


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 84  KIKASASRQTS*NNN*KYR*LFNSITRSRYSTEHMLFY 197
           KI +S S  T  NNN KY    N+   + Y+ +  L+Y
Sbjct: 79  KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKK--LYY 114


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
 Frame = +2

Query: 209 YLLFIYCT-----IIQNNEIIEDKLV 271
           Y  FI C      IIQN+EI  DKLV
Sbjct: 75  YSCFITCALEKSHIIQNDEIQLDKLV 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,902
Number of Sequences: 438
Number of extensions: 3801
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)