Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P02
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   5.1  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   6.8  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.0  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +1

Query: 178 YLREVKVFVK--SFYAFHM-CWFTATITGFEYCTLC 276
           Y    KV+V     Y  H+ C   AT  G  +CTLC
Sbjct: 25  YAAAEKVWVDRDKVYCGHLDCTRVATFKGERFCTLC 60


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -2

Query: 223 GTHKTTLRRPSPPADIQASRKSDVRQYYKTN*KYTNRGRPRSL*KVVGY 77
           G +   LRR S P+ ++AS    + ++     +   +GR  +  ++ GY
Sbjct: 56  GWYTPRLRRSSRPSSMRASTMKKLNEWLDAYQQERGKGRSMTDLRLAGY 104


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 244 TITGFEYCTLCFSTALQRLNCQPSTFALLYI 336
           T+T F    L     +  L C P TF  L++
Sbjct: 169 TVTNFFITNLAVGDLMMTLFCVPFTFISLFV 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,429
Number of Sequences: 2352
Number of extensions: 13624
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)