Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P02
(683 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 153 2e-37
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 153 2e-37
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 153 2e-37
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 153 2e-37
AY075463-1|AAL68276.1| 245|Drosophila melanogaster RE18374p pro... 29 4.5
AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-P... 29 4.5
AY069353-1|AAL39498.1| 696|Drosophila melanogaster LD05963p pro... 29 7.8
AE014134-2323|AAF53277.1| 696|Drosophila melanogaster CG6116-PA... 29 7.8
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 153 bits (372), Expect = 2e-37
Identities = 78/198 (39%), Positives = 112/198 (56%)
Frame = -3
Query: 657 YMKMFELFNETLWSTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 478
Y+ + ELF+E + T+ GQ LD + NR S FT++ + LP +L
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279
Query: 477 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 298
L LA D + ++ ++ I LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339
Query: 297 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 118
A+QR Q+ + CYG EPA VER+K LY++L LP Y E+ Y+ I I+
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399
Query: 117 IEAARVLFKKLLDITYNR 64
F ++L+ Y R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 153 bits (372), Expect = 2e-37
Identities = 78/198 (39%), Positives = 112/198 (56%)
Frame = -3
Query: 657 YMKMFELFNETLWSTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 478
Y+ + ELF+E + T+ GQ LD + NR S FT++ + LP +L
Sbjct: 183 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 240
Query: 477 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 298
L LA D + ++ ++ I LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV
Sbjct: 241 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 300
Query: 297 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 118
A+QR Q+ + CYG EPA VER+K LY++L LP Y E+ Y+ I I+
Sbjct: 301 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 360
Query: 117 IEAARVLFKKLLDITYNR 64
F ++L+ Y R
Sbjct: 361 RGVPHQTFLQILNKIYQR 378
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 153 bits (372), Expect = 2e-37
Identities = 78/198 (39%), Positives = 112/198 (56%)
Frame = -3
Query: 657 YMKMFELFNETLWSTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 478
Y+ + ELF+E + T+ GQ LD + NR S FT++ + LP +L
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279
Query: 477 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 298
L LA D + ++ ++ I LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339
Query: 297 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 118
A+QR Q+ + CYG EPA VER+K LY++L LP Y E+ Y+ I I+
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399
Query: 117 IEAARVLFKKLLDITYNR 64
F ++L+ Y R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 153 bits (372), Expect = 2e-37
Identities = 78/198 (39%), Positives = 112/198 (56%)
Frame = -3
Query: 657 YMKMFELFNETLWSTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 478
Y+ + ELF+E + T+ GQ LD + NR S FT++ + LP +L
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279
Query: 477 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 298
L LA D + ++ ++ I LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339
Query: 297 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 118
A+QR Q+ + CYG EPA VER+K LY++L LP Y E+ Y+ I I+
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399
Query: 117 IEAARVLFKKLLDITYNR 64
F ++L+ Y R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417
>AY075463-1|AAL68276.1| 245|Drosophila melanogaster RE18374p
protein.
Length = 245
Score = 29.5 bits (63), Expect = 4.5
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Frame = -3
Query: 456 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 280
D+ + + A IG FQ+ DD +D + GK D++ T + A ++
Sbjct: 115 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 174
Query: 279 EAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARV 100
E V + SEP VER L H + + K + IR + + +
Sbjct: 175 ELNPMVMRR---FSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQK 231
Query: 99 LFKKLLDITYNR 64
+ + D+ NR
Sbjct: 232 GLQVVADLVINR 243
>AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-PA
protein.
Length = 436
Score = 29.5 bits (63), Expect = 4.5
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Frame = -3
Query: 456 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 280
D+ + + A IG FQ+ DD +D + GK D++ T + A ++
Sbjct: 306 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 365
Query: 279 EAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARV 100
E V + SEP VER L H + + K + IR + + +
Sbjct: 366 ELNPMVMRR---FSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQK 422
Query: 99 LFKKLLDITYNR 64
+ + D+ NR
Sbjct: 423 GLQVVADLVINR 434
>AY069353-1|AAL39498.1| 696|Drosophila melanogaster LD05963p
protein.
Length = 696
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 353 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 225
+++L +IY NV G QF C H QY+ A N +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465
>AE014134-2323|AAF53277.1| 696|Drosophila melanogaster CG6116-PA
protein.
Length = 696
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 353 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 225
+++L +IY NV G QF C H QY+ A N +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,484,714
Number of Sequences: 53049
Number of extensions: 590798
Number of successful extensions: 1593
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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