Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O24
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1216 - 25344638-25345159,25346011-25346511                       30   1.7  
07_03_1091 + 23899825-23900649,23900750-23900998,23901104-239011...    29   4.0  

>08_02_1216 - 25344638-25345159,25346011-25346511
          Length = 340

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 567 HHTLASSHHFILALLQHTQLSSVTSSISIFYTSFRNEPGKIVAYSQHAACH 719
           HH L +S H    LLQH+  +S  SS +     F NEP    +   H +C+
Sbjct: 225 HHDLPTSFH--PPLLQHSHANSKNSSSNNGGFVFPNEPNTTNSSDNHISCN 273


>07_03_1091 +
           23899825-23900649,23900750-23900998,23901104-23901195,
           23901413-23902193
          Length = 648

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 607 NASMKWCEEANV*WSNIRSDLLFSTQK*FKQ 515
           ++S+KWCE +NV WS + S LL   ++  KQ
Sbjct: 334 SSSIKWCE-SNVMWSTLSSSLLKHGKEAVKQ 363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,070,786
Number of Sequences: 37544
Number of extensions: 344088
Number of successful extensions: 663
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)