Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O24
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB...    32   0.97 

>AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB,
           isoform B protein.
          Length = 426

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = +3

Query: 48  MDKPRYFHLQIKMDTFLL*YLADKQINWL*TTIHFFGVYKSLRQLKKAFKHMDFEHVECV 227
           +D P   H Q + DT    +L     + L  T+ F G Y     L+++F H+D   V C 
Sbjct: 25  IDSPVEHHTQ-QEDTSAEVFLWLLAYSVLMFTLPFLGFYGVRSWLQESFPHLDLFTVNCW 83

Query: 228 ATLP*FVIYFTLTANYILVKF 290
           + L   V+   + A Y+L  F
Sbjct: 84  SVLTAVVVVNLVVAMYVLKAF 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,190,987
Number of Sequences: 53049
Number of extensions: 661463
Number of successful extensions: 1577
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)