Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O24
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024503-11|AAG24091.2|  325|Caenorhabditis elegans Serpentine r...    30   1.5  
Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93379-5|CAB07593.3|  351|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z71177-7|CAI46554.1|  351|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    29   4.7  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    28   6.2  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    28   6.2  
Z68335-2|CAA92731.1|  390|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF024503-11|AAG24091.2|  325|Caenorhabditis elegans Serpentine
           receptor, class u protein24 protein.
          Length = 325

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 238 GNVATHSTCSKSMCLNAFFNCLKLLYTPKKCIVVYNQFICLSAKYYNKNVSI 83
           GN+A  +       L      + +LY P  C++V+     L  +Y NKNV+I
Sbjct: 13  GNIAYINYQFSFFTLPVLLLFVPVLYIPATCVIVFRICSTLLIEYKNKNVNI 64


>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 31  GYKQHTWINHDISTYKLKWIHFYYNI*LIN 120
           G  Q T + HD+ TYK ++  F +N  ++N
Sbjct: 184 GQSQATSLGHDVETYKARFAAFGFNAIIVN 213


>Z93379-5|CAB07593.3|  351|Caenorhabditis elegans Hypothetical
           protein F21H7.7 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 510 VCSFLFYFRSQSSSLHTIRF*MSCLKI-FLSY 418
           +CS+ + F S+SSSL   RF +S  KI FL Y
Sbjct: 124 ICSYTYLFESRSSSLPQNRFRISRRKIKFLYY 155


>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>Z71177-7|CAI46554.1|  351|Caenorhabditis elegans Hypothetical
           protein AC3.10 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 474 STEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           S E+E+++K  TP+  N + VEKS  + +   +T+
Sbjct: 98  SKELEDRLKAVTPMEKNRYVVEKSTPEQLAQQNTI 132


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 TEIENKIKNYTPICLNHFCVEKSRSDLIFDHHTL 578
           T   N+  NY P C  +F VE+  +   FDH+T+
Sbjct: 385 TAQHNRKGNYYPACYINFQVEEISTQPNFDHYTI 418


>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
            protein D1007.15 protein.
          Length = 1184

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 507  TPICLNHFCVEKSRSDLIFDHHTLASSHHFILALLQHTQLSSVTSSISIFY 659
            T   L+H  + K  S ++   H ++S  H +L +L  + L SVT  +S F+
Sbjct: 895  TDFRLDHVKLLKMSSLIVCARHRMSSFRHSLLFILYASLLYSVTILMSTFF 945


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = +3

Query: 72  LQIKMDTFLL*YLADKQI-----NWL*TTIHFFGVYKSLRQLKKAFKHMDFEHVECVATL 236
           + + M+TF +  L+ K +     N +  ++    +   L  + K F  +D E+ ECV + 
Sbjct: 32  VSVLMNTFHIFILSQKSMRTSSTNVILISLSVCDIAGGLTTIYKHFLMVDAENSECVTST 91

Query: 237 P*FVIYFTLTANYILVKF 290
             + IYF +T   I++ F
Sbjct: 92  SLWKIYFDITLWSIIIHF 109


>Z68335-2|CAA92731.1|  390|Caenorhabditis elegans Hypothetical
           protein C29F4.3 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 205 SMCLNAFFNCLKLLYTPKKCIVVYNQFICLSAKYYNKNVSILICK 71
           S  LN  FN   +L     CI  YN F+CL    Y KN+ + +C+
Sbjct: 108 SEALNQIFNMTIIL----SCIA-YN-FMCLFVANYRKNIPLPVCR 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,587,830
Number of Sequences: 27780
Number of extensions: 385085
Number of successful extensions: 994
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)