BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_O22
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 23 3.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.1
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 6.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.0
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 661 LIFSFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
+I S + NY Y N KK + KL + NY + P + IYC N
Sbjct: 81 IISSLSNNYNYNNN---NYKKLYCNNYKKLYYNINYIEQIPIPVPIYCGN 127
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 661 LIFSFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
+I S + NY Y N KK + KL + NY + P + IYC N
Sbjct: 81 IISSLSNNYNYNNN---NYKKLYCNNYKKLYYNINYIEQIPIPVPIYCGN 127
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 661 LIFSFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
+I S + NY Y N KK + KL + NY + P + IYC N
Sbjct: 81 IISSLSNNYNYNNN---NYKKLYCNNYRKLYYNINYIEQIPIPVPIYCGN 127
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 635 QVLTECSVSKKKNIHFYYLQIIK 567
Q++TECS N+H +I +
Sbjct: 99 QLITECSAISDTNVHLKITKIFQ 121
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 320 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 362
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 652 SFTFNYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
S + NY Y N K + + Y + NY + P + +YC N
Sbjct: 320 SLSNNYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 362
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 505 YFHSHSKYLNYKDI*LNNYKNL 570
Y ++++ Y NY + NNYK L
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKL 351
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 640 NYKY*LNVALAKKKTFTFITYKLLNSCNY*VKYPCSLDIYCAN 512
NY Y N K + + Y + NY + P + +YC N
Sbjct: 91 NYNYNNNYNNYNKHNYNKLYYNI----NYIEQIPIPVPVYCGN 129
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 YSTLQVVTNQNNLSMKTVVK 402
+S V+ N+NN SMK V+
Sbjct: 483 FSYTIVINNRNNTSMKGTVR 502
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 511 HSHSKYLNYKDI*LNNYKN 567
+ +S Y NY + NNY N
Sbjct: 322 YKYSNYNNYNNYNNNNYNN 340
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 184 YHQYNN*NDWTKNINIWFKNW 246
Y+ YNN N N +++KN+
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNY 350
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,687
Number of Sequences: 438
Number of extensions: 3398
Number of successful extensions: 31
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -