Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O16
         (724 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0612 + 4902197-4902929,4903443-4904071                           30   1.6  
12_01_0419 - 3316866-3318172,3318249-3318360                           30   2.1  
09_04_0559 + 18516732-18516746,18516893-18517330                       30   2.1  
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243...    29   2.8  
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098...    29   3.7  

>11_01_0612 + 4902197-4902929,4903443-4904071
          Length = 453

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -3

Query: 644 SAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLAD 522
           +AA  PN V  ID+       AAA P  + PEAA  P L D
Sbjct: 25  AAAAAPNQVA-IDVVVVHHHGAAAAPGQQAPEAAPVPHLLD 64


>12_01_0419 - 3316866-3318172,3318249-3318360
          Length = 472

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = -3

Query: 710 ATVXEISKEEKPSATDAEGSXDSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPK 531
           ATV E  + + P+A +       A   P   +     P  E   AA PE + P+    P 
Sbjct: 306 ATVDEPEQPKPPAAVEPPVQEPPAEETPTATEPEPEPPAAEEPPAAEPE-QEPQPETPPV 364

Query: 530 LADNPVDEDKP 498
            ++ P +E  P
Sbjct: 365 ESETPAEEQAP 375


>09_04_0559 + 18516732-18516746,18516893-18517330
          Length = 150

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 686 EEKPSATDAEGSXDSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDE 507
           E +P+  +AE + +  A  P    + + A   E  A    E+K  EAA AP   +  V+E
Sbjct: 78  EPEPAEPEAEPAKEEVAPEPAAAAEAE-AKEAEPAAQVAEEVKEEEAAPAPAAEEVKVEE 136

Query: 506 DKP 498
             P
Sbjct: 137 AAP 139


>08_02_1034 +
           23823194-23823307,23823399-23823620,23823984-23824309,
           23824648-23824777,23825145-23825441,23825550-23825815,
           23827835-23828333,23828902-23828993,23829571-23829735,
           23829817-23830204,23830275-23830393,23830494-23830524,
           23830675-23830880,23830970-23831014,23831120-23831201,
           23832210-23832398,23834499-23834602,23834669-23834759,
           23835097-23835225,23835425-23835556,23835779-23835949,
           23836143-23836171,23836214-23836301,23836313-23836391,
           23836666-23836844
          Length = 1390

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = +1

Query: 136 TPLSLTWGSFTHICYS*SLALAAEHELM 219
           TPL L WGSF   CY  SL    EH  M
Sbjct: 236 TPLQLQWGSFQSYCYR-SLIDGMEHIAM 262


>01_06_0765 -
           31808775-31809443,31809547-31809703,31809777-31809894,
           31810170-31810308
          Length = 360

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = -3

Query: 722 TEVQATVXEISKEEKPSATDAEGSXDSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAA 543
           T++     E+ K  +  AT      D+   +    K++    +  S AAA P   +P A 
Sbjct: 151 TKLGKVQDELKKLREQLATAEAAKKDAQVALEEAKKRVGTKGSPASAAAASPRSPSPVAV 210

Query: 542 DAPKLADNPVDEDKP 498
           + PK  +  +   +P
Sbjct: 211 ETPKKTEQQLKVTEP 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,620,698
Number of Sequences: 37544
Number of extensions: 223234
Number of successful extensions: 653
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)