Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O14
         (322 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000368-1|BAA91116.1|  251|Homo sapiens protein ( Homo sapiens ...    29   4.1  
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.     29   4.1  

>AK000368-1|BAA91116.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20361 fis, clone HEP16789. ).
          Length = 251

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 113 GAIIRSSYDLFSENVVLFVLSIINFMTLPDIYWRIIIIDYFS*LRATNC 259
           G +I+ SY  F   +  F + + +   L +I WR ++ID    L+  NC
Sbjct: 181 GRVIKGSYK-FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 228


>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
          Length = 1967

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 113 GAIIRSSYDLFSENVVLFVLSIINFMTLPDIYWRIIIIDYFS*LRATNC 259
           G +I+ SY  F   +  F + + +   L +I WR ++ID    L+  NC
Sbjct: 306 GRVIKGSYK-FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,626,369
Number of Sequences: 237096
Number of extensions: 587771
Number of successful extensions: 677
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)