Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O14
         (322 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical ...    27   3.0  
Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical pr...    26   5.3  
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p...    25   9.2  
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p...    25   9.2  
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr...    25   9.2  
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    25   9.2  
Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical pr...    25   9.2  
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       25   9.2  
U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein ...    25   9.2  

>AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.5 protein.
          Length = 490

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 140 NRS*IELSPPKSPVY*IL*KSLEPF*RFRLYKYL 39
           N +  EL  PKSPV  I   SLEPF   R+  Y+
Sbjct: 76  NATLFELLEPKSPVLSIKPDSLEPFGTTRMSIYM 109


>Z81579-9|CAN99688.1|  225|Caenorhabditis elegans Hypothetical
           protein R13H4.2a protein.
          Length = 225

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -1

Query: 127 SNYRPRNPLYTKFYENRWSRFR----DSDYISTY 38
           S+Y P NP Y   Y + W+R++    D DY S+Y
Sbjct: 100 SDYLP-NPYYWNNYGSYWTRYKGYWYDYDYPSSY 132


>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
           protein F58A3.2c protein.
          Length = 1158

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 86  IKFSIQGISGAIIRSSYDLFSENVVLFVLSIINFMTLPDIY 208
           I  S QG+    + ++Y   S N  + V+   ++   PDI+
Sbjct: 99  IDVSDQGLWSCRVHNAYGQISRNFTVEVIDFCDYFLFPDIH 139


>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
           protein F58A3.2e protein.
          Length = 1051

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 86  IKFSIQGISGAIIRSSYDLFSENVVLFVLSIINFMTLPDIY 208
           I  S QG+    + ++Y   S N  + V+   ++   PDI+
Sbjct: 99  IDVSDQGLWSCRVHNAYGQISRNFTVEVIDFCDYFLFPDIH 139


>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
           protein F58A3.2d protein.
          Length = 1096

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 86  IKFSIQGISGAIIRSSYDLFSENVVLFVLSIINFMTLPDIY 208
           I  S QG+    + ++Y   S N  + V+   ++   PDI+
Sbjct: 99  IDVSDQGLWSCRVHNAYGQISRNFTVEVIDFCDYFLFPDIH 139


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 86  IKFSIQGISGAIIRSSYDLFSENVVLFVLSIINFMTLPDIY 208
           I  S QG+    + ++Y   S N  + V+   ++   PDI+
Sbjct: 99  IDVSDQGLWSCRVHNAYGQISRNFTVEVIDFCDYFLFPDIH 139


>Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical
           protein F35G12.6 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 292 IFDNAICCVFKAVSCSQLRKIVYYYYSPIDVGKSHKV 182
           I D  +  + + VSC Q R+  +Y+   +D+ +S  V
Sbjct: 301 IGDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSKPV 337


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 86  IKFSIQGISGAIIRSSYDLFSENVVLFVLSIINFMTLPDIY 208
           I  S QG+    + ++Y   S N  + V+   ++   PDI+
Sbjct: 99  IDVSDQGLWSCRVHNAYGQISRNFTVEVIDFCDYFLFPDIH 139


>U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein
           protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 292 IFDNAICCVFKAVSCSQLRKIVYYYYSPIDVGKSHKV 182
           I D  +  + + VSC Q R+  +Y+   +D+ +S  V
Sbjct: 301 IGDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSKPV 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,276,225
Number of Sequences: 27780
Number of extensions: 105550
Number of successful extensions: 211
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)