Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O13
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   3.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.1  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 353 HVRNWIEHDIVLLSVGTSSSKH 418
           H+RN +E   VL+ +G  +S+H
Sbjct: 63  HLRNCLEKLKVLVPLGPETSRH 84


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 3   ENYMLXRHHLKKKVVSSSLRRLIALP 80
           +NY L +H LK+  V + L   +  P
Sbjct: 585 QNYSLAKHQLKEAFVKAHLGSWVKKP 610


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 469 QTATRVNMFVKLNSSANMFTGTSSDTQKNDV 377
           +  T  NMF K N S +  +GT+   + +D+
Sbjct: 714 RNVTTCNMFRKTNLSGDSSSGTTLLLELDDI 744


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,705
Number of Sequences: 438
Number of extensions: 2782
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)