Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O09
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L17337-3|AAA28222.1|  331|Caenorhabditis elegans Hypothetical pr...   118   5e-27
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    27   9.7  

>L17337-3|AAA28222.1|  331|Caenorhabditis elegans Hypothetical
           protein ZK686.3 protein.
          Length = 331

 Score =  118 bits (283), Expect = 5e-27
 Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
 Frame = -2

Query: 695 KWIQDXTDVQIRVFRSPNYSAAVAFSTLFIILAGFLYIRRNNLEFLYNKQLWAVCAVFFC 516
           +++ D T+V +RV R PNY+A V  +    +L G LY++RN+L+FL+N+ +W    +   
Sbjct: 148 RFVADQTEVHVRVIRPPNYTAPVVIALFVALLLGMLYMKRNSLDFLFNRTVWGFVCLAIT 207

Query: 515 FAMVSGQMWNQIRGPPFF--HRTKTGPVYINGGSHGQFVLESYIVAILNGAVVVGMILMI 342
           F  +SGQMWN IRGPPF   +     P +I+G +  Q + E+YIV +L   + +G I + 
Sbjct: 208 FIFMSGQMWNHIRGPPFMITNPNTKEPSFIHGSTQFQLIAETYIVGLLYALIAIGFICVN 267

Query: 341 EAAGGVKNHDPTRTLAEGKRRRFQ---------SVVGXXXXXXXXXXXXXXFRAKTQGYP 189
           EAA    + D  R  A  K              ++ G              FR+K +GYP
Sbjct: 268 EAADQSNSKD--RKNAGKKLNPLSLLNIPTNTLAIAGLVCICVFFSFLLSVFRSKYRGYP 325

Query: 188 YSFLF 174
           YSFLF
Sbjct: 326 YSFLF 330


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 407 VLESYIVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSV 264
           VLE   V  +N +V  GMIL      G+      + +AE   R+FQ V
Sbjct: 314 VLEHLAVCKMNNSVK-GMILCFTGPPGIGKTSIAKAIAESMGRKFQRV 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,874,230
Number of Sequences: 27780
Number of extensions: 338382
Number of successful extensions: 809
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)