Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O07
         (409 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0042 - 27265687-27267159                                         28   2.5  
03_01_0654 - 4791998-4792085,4792250-4792674                           27   5.7  

>05_07_0042 - 27265687-27267159
          Length = 490

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 205 IPFEIAPAYARCSWADIL 258
           +PF + P YA+C W D L
Sbjct: 184 LPFMVRPEYAQCLWGDTL 201


>03_01_0654 - 4791998-4792085,4792250-4792674
          Length = 170

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 70  FQNQQGSSVSRLCCSLSTPSYIKYPMXXGGATLKTLSRN 186
           +Q  QG+ V R    L    Y KY    G AT K  S+N
Sbjct: 132 YQVGQGNKVRRRRFGLRKTFYTKYGNGGGNATYKEFSKN 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,692
Number of Sequences: 37544
Number of extensions: 172078
Number of successful extensions: 348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)