Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_O02
         (671 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0191 - 18293842-18294273                                         30   1.9  
09_02_0384 - 8294914-8297817                                           29   4.5  
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912...    28   7.8  
01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780...    28   7.8  

>03_04_0191 - 18293842-18294273
          Length = 143

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 436 LYRRLHGLAAPTSPPPEPDHLVKH 365
           LY  LHG+ A  +PPP P   VKH
Sbjct: 36  LYSPLHGMVAA-APPPPPPQFVKH 58


>09_02_0384 - 8294914-8297817
          Length = 967

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/50 (24%), Positives = 30/50 (60%)
 Frame = +1

Query: 67  STKVGLEGFIYISLMCVLQAYGPPGVKWLPESMDIYNVNSATMNSLNNSL 216
           S K+G+E  +YI ++C+++  G   + W+ +   + +++ +  + LN+ L
Sbjct: 763 SVKIGVE-LLYIRMLCIVENNGLGDITWVLKLPQLEHLDLSFCSKLNSVL 811


>03_05_1139 -
           30689514-30689609,30689795-30689956,30691245-30691299,
           30691695-30691959,30692749-30692959,30693542-30693721,
           30693802-30693899,30694211-30694277,30694897-30694963,
           30695335-30695447,30695988-30696032,30696116-30696223,
           30696582-30696791,30697464-30697670,30697786-30697875,
           30698168-30698389
          Length = 731

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 439 QLYRRLHGLAAPTSPPPEPDHLV 371
           +L  R+ G AAP   PP P HLV
Sbjct: 28  KLEARMAGKAAPVPSPPPPHHLV 50


>01_06_0157 +
           27075179-27075529,27075849-27076043,27077705-27078036,
           27078157-27078577
          Length = 432

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 19  QEWQTEAALVLKAF--YHSTKVGLEGFIYISLMCVLQAYGPPG 141
           Q W TE A  +K+    H  +VGLEGF   S    + A  P G
Sbjct: 223 QSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSG 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,312,020
Number of Sequences: 37544
Number of extensions: 275225
Number of successful extensions: 835
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)