Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_N23
         (335 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41515-1|AAA91179.1|   70|Homo sapiens DSS1 protein.                   64   1e-10
CR456887-1|CAG33168.1|   70|Homo sapiens SHFM1 protein.                64   1e-10
BC032782-1|AAH32782.1|   70|Homo sapiens split hand/foot malform...    64   1e-10
AC073230-1|AAQ93368.1|   70|Homo sapiens unknown protein.              64   1e-10
U97670-1|AAC78729.1|  258|Homo sapiens eukaryotic translation in...    29   2.7  

>U41515-1|AAA91179.1|   70|Homo sapiens DSS1 protein.
          Length = 70

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 223 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQSGK 47
           KQ VDLG          FPAE+W   D +DED  VWEDNW+DD ++DDF+ QLR +  K
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62


>CR456887-1|CAG33168.1|   70|Homo sapiens SHFM1 protein.
          Length = 70

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 223 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQSGK 47
           KQ VDLG          FPAE+W   D +DED  VWEDNW+DD ++DDF+ QLR +  K
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62


>BC032782-1|AAH32782.1|   70|Homo sapiens split hand/foot
           malformation (ectrodactyly) type 1 protein.
          Length = 70

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 223 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQSGK 47
           KQ VDLG          FPAE+W   D +DED  VWEDNW+DD ++DDF+ QLR +  K
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62


>AC073230-1|AAQ93368.1|   70|Homo sapiens unknown protein.
          Length = 70

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 223 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQSGK 47
           KQ VDLG          FPAE+W   D +DED  VWEDNW+DD ++DDF+ QLR +  K
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62


>U97670-1|AAC78729.1|  258|Homo sapiens eukaryotic translation
           initiation factor eIF3, p35 subunit protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2

Query: 163 ENWGTEDADDEDVSVWEDNWEDD 95
           + WG ED +DEDV   +DNW+DD
Sbjct: 37  DRWGGED-EDEDV---KDNWDDD 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,171,326
Number of Sequences: 237096
Number of extensions: 720847
Number of successful extensions: 1708
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)