Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_N23
         (335 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical ...    46   5e-06
Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    28   1.9  
AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine r...    27   2.5  
Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical...    26   5.8  
AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical ...    26   5.8  
Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical pr...    26   7.7  

>AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical
           protein Y119D3B.15 protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = -2

Query: 169 PAENWGTE-DADDEDVSVWEDNWEDDVIQDDFNQQLRQQSGK 47
           P + W    + +++DV+VWEDNW+D+  + +F++QL+++  K
Sbjct: 35  PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76


>Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical
           protein ZC443.4 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -2

Query: 148 EDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQSG---KX*RIRNLNFS--LSCN 5
           ED DD+D    E+N EDD  ++DD + +   QS    +     N+NF    SCN
Sbjct: 277 EDDDDDDDEEEEENVEDDENLEDDEDDRTEDQSSIRCRQSESENINFPDFQSCN 330


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -2

Query: 148 EDADDEDVSVWEDNWEDDVIQDDF 77
           +D DDED   +ED+ E+DVI D++
Sbjct: 718 DDDDDEDCDDFEDD-EEDVIDDEY 740


>AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 19 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 209 VYFLFVSHYTVMIIEIRKYHLL 274
           VY LFV  Y+++  E+RKYH L
Sbjct: 63  VYLLFVIAYSLIPEELRKYHNL 84


>Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical
           protein W01G7.4 protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 142 ADDEDVSVWEDNWEDD 95
           ADDED S  EDNW +D
Sbjct: 171 ADDEDDSNDEDNWRND 186


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 145  DADDEDVSVWEDNWEDDVIQDDFNQQLRQQS 53
            D  DED+  +EDNW   +I + FN +L   S
Sbjct: 1079 DEIDEDIKQFEDNW---LIYEMFNNELDTMS 1106


>AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical
           protein Y54G11A.14 protein.
          Length = 450

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = -2

Query: 148 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQ 56
           +D ++ED    ED  ED+   D+ N++++++
Sbjct: 59  DDEEEEDEDEEEDEAEDEAEDDEENEEVKEE 89


>AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical
           protein T10B5.3 protein.
          Length = 295

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 166 AENWGTEDADDEDVSVWEDNWEDDVIQDD 80
           +E++ T  +DD+  S  +D WED+ +++D
Sbjct: 226 SEDFDTIGSDDDGESSEDDWWEDNELKED 254


>Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical
           protein F57G4.8 protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 145 DADDEDVSVWEDNWED 98
           D DDEDV  W +N +D
Sbjct: 140 DNDDEDVQYWRENVDD 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,730,059
Number of Sequences: 27780
Number of extensions: 123444
Number of successful extensions: 435
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)