Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_N21
(742 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 216 2e-57
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 33 0.032
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 30 0.30
SPAC19A8.14 |||aminoacyl-tRNA hydrolase |Schizosaccharomyces pom... 30 0.40
SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr 1... 29 0.92
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 28 1.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.2
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 28 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyce... 27 2.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 2.8
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 2.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 3.7
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 27 3.7
SPCC330.10 |pcm1||mRNA capping methyltransferase|Schizosaccharom... 26 4.9
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 26 4.9
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 26 4.9
SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr ... 26 6.5
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 6.5
SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.5
SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr ... 26 6.5
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 26 6.5
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 26 6.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.6
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 25 8.6
SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 25 8.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 8.6
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 8.6
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 8.6
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.6
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 216 bits (528), Expect = 2e-57
Identities = 107/228 (46%), Positives = 150/228 (65%), Gaps = 2/228 (0%)
Frame = -2
Query: 732 LPEDSSCLLLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVE-RDTEGGLVLADMGE 556
L + +LDIGCGSG+S + E GH+ +GMDIS SML VA+E ++ EG L+L DMG
Sbjct: 43 LDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGT 102
Query: 555 GVPFRAGCFDGAVSVSAIQWLFNADKKTHNPVKRLNKFFTTLYSSLSRSARAVFQFYPEN 376
GVPFR G FDG +S+SAIQWL NADK + P +RLN+FF TLY S+ R RAV Q+YPE
Sbjct: 103 GVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPET 162
Query: 375 EKQLELLTTQAMKAGFYGGVVIDYPNSAKAKKFFLVLMTGGVGPLPQALGTEEPDSLQVK 196
EK +++ A KAGF GG+V+D+P S + KK++LVL GG L + T + + K
Sbjct: 163 EKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAGGTRTLDISSMTLDQEGTNAK 222
Query: 195 YAKREATKGIRGKPIKNSKDWILEKKERRRKQGKITKP-DTKDTGRKR 55
K ++ K +++++I+ KKE RK+G++ P D+K +GR+R
Sbjct: 223 QRK------LKKKQDMSTREYIIHKKELNRKRGRLHVPKDSKYSGRRR 264
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 33.5 bits (73), Expect = 0.032
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 720 SSCLLLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVERDTEGGLVLAD-MGEGVPF 544
SS LLD+GCG G+ +G+D S M+ A E ++ + + +
Sbjct: 33 SSDELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAARELGLNAYVIPGEKLLDASEI 92
Query: 543 RAGCFDGAVSVSAIQWLFNADKKTHNPVKRLNKFFTT 433
+ FD S +A+ W+ K +K +++ T
Sbjct: 93 PSESFDVVFSNAALHWIMRQPKNRPIVMKGVSRVLRT 129
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 30.3 bits (65), Expect = 0.30
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 530 KQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHI 649
KQP+ N P+PI+ + + ST++SS + + P+ +
Sbjct: 186 KQPSFNSNPAPITTSSATHTSQFSTSSSSSVNSVHTPVMV 225
>SPAC19A8.14 |||aminoacyl-tRNA hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 29.9 bits (64), Expect = 0.40
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -2
Query: 411 SARAVFQFYPENEKQLELLTTQAMKAGFYGGVVIDYPNSAKAKKFFLVLMTGGVGPLPQA 232
+ +A + E+ LELL QAM G V+ D + A VL G+GP P +
Sbjct: 137 AGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVL---GIGPGPVS 193
Query: 231 LGTEEPDSLQV 199
+ E SL++
Sbjct: 194 VINEVTGSLKL 204
>SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2
Query: 708 LLDIGCGSG--LSGTVXEENGHMWIGMDISSSMLDVAVERDTEGGLVLADMGEG 553
+LDIGCGSG L+ E+G W+ + + + + GL L D EG
Sbjct: 147 VLDIGCGSGRDLAWICFRESGKHWMVSALDAEKRAIQRFSELFSGLGLEDRIEG 200
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -2
Query: 708 LLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVER-DTEGGLV---LADMGEGVPFR 541
+LD GC + G+ +G+DIS + A+++ +E V D F+
Sbjct: 13 VLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFNQRDFSRLNEFK 72
Query: 540 AGCFDGAVSVSAIQWLFNADKKTH 469
G FD + + + N+D + H
Sbjct: 73 -GHFDTVIDIGCFHSILNSDHEPH 95
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 548 GTPSPISARTKPPSVSLSTATSSIED-DMSIPIHICPFSSXTV--PDNPEPHPIS 703
GTP+ SA PPS+ S + P I P S+ TV P N P PI+
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIA 276
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 720 SSCLLLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVER 595
S +LD CG+GL +G+D+S M+DV E+
Sbjct: 77 SGMSILDFACGTGLISQHLFPYCKQIVGIDVSQDMVDVYNEK 118
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 539 ALNGTPSPISARTKPPSVSLSTATSSIEDDMS-IPIHICPFSSXTVPDNPEPHPI 700
A+N PS R SVS + SSIED+ S +P+ ++ P N P +
Sbjct: 1393 AVNARPSAPERRDSFGSVSSGSNVSSIEDETSTMPLKASQPTNPGAPSNHAPQVV 1447
>SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 462 VKRLNKFFTTLYSSLSRSARAVFQFYPENEKQLELLTTQAMKAGFYGGVVIDYPNS 295
VK +F YSSL + + +FY EN L L + M+ + ++++ P S
Sbjct: 5 VKYAQEFVQRYYSSLDTNRNGIAEFYREN--SLILWNGKPMQVTEFTSMIVNLPYS 58
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 557 SPISARTKPPSVSLSTAT-SSIEDDMSIPIHICPFSSXTVPDNPEPHPISNNKHDESSGN 733
S +S T+P S + T T SSI + P SS +VP + P S+ SS
Sbjct: 431 SYVSTVTQPASTRVQTTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSA 490
Query: 734 XS 739
S
Sbjct: 491 SS 492
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 708 LLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVERDTEGGL 577
+LD+GCG+G+ + G + +S ++ +A+ E GL
Sbjct: 259 VLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMAISNAFENGL 302
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 503 IADTDTAPSKQPALNGTPSPISARTKPPSVSLS-TATSSIEDDMSIPIHICPFSSXTVPD 679
+ T+T PS+ P + G P A T P S ++ + PI PF+ P
Sbjct: 124 VGKTNTFPSQVPNMFGPPLYHPAATAPSEFMPSIPGFGNLPNPAMPPIPFLPFNPAAQPP 183
Query: 680 NPEP 691
P P
Sbjct: 184 FPPP 187
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 605 ATSSIEDDMSIPIHICPFSSXTVPDNPEPHPISNN 709
+TSS D+ P+HI P N P+ + NN
Sbjct: 136 STSSFVDEAEFPVHI-PGLEDATSSNMSPNSVQNN 169
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 495 LFNADKKTHNPVKRLNKFFTTLYSSLSRSARAVF 394
L++ KK +L FTTLY++ ++ AVF
Sbjct: 585 LYDLRKKLKQSAPKLQNIFTTLYTAWCHNSIAVF 618
>SPCC330.10 |pcm1||mRNA capping
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 389
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 723 DSSCLLLDIGCGSGLSGTVXEENG-HMWIGMDISSSMLDVAVERDTE 586
D L+LD+GCG G ++ G +IG+DI+ ++ A +R E
Sbjct: 138 DYPILVLDMGCGKGGDLIKWDKAGIDGYIGIDIAEVSVNQAKKRYRE 184
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 123 KKERRRKQGKITKPDTKDTGRKR 55
K ER R K+T P+TK TG K+
Sbjct: 297 KSERVRASKKLTGPNTKFTGDKK 319
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 165 RGKPIKNSKDWILEKKERRRKQGKITKPDTKD 70
RG P K DW E+KE+ +Q I + +D
Sbjct: 677 RGDPEKKDVDWYTEEKEKIARQLVINREAFED 708
>SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 25.8 bits (54), Expect = 6.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -2
Query: 708 LLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVER-DTEGGLV---LADMGEGVPFR 541
+LD GC + G+ +G+DIS + A+++ +E V D F+
Sbjct: 13 VLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFNQRDFSRLNEFK 72
Query: 540 AGCFDGAVSVSAIQWLFNADKKTH 469
G FD + + + N+D + +
Sbjct: 73 -GHFDTVIDIGCFHSILNSDHEPY 95
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 156 PIKNSKDWILEKKERRRKQGKITKPDTKD 70
P++ KD K +R+KQ K KPDT++
Sbjct: 483 PVQRRKDGKFAKSTKRKKQ-KSLKPDTEN 510
>SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = +2
Query: 491 NNHCIADTDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSXT 670
N+ D P PA NG +P++A +V+ S ++ S+P F
Sbjct: 266 NSSTPTDQTLRPPNPPAANGNATPVTAVNNVSAVADSPQSTGSSVSSSLPTLSLDFKQEY 325
Query: 671 VPDNPEPHPISNN 709
+N + +S++
Sbjct: 326 SGNNHDMSGLSSS 338
>SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 25.8 bits (54), Expect = 6.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -2
Query: 708 LLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVAVER-DTEGGLV---LADMGEGVPFR 541
+LD GC + G+ +G+DIS + A+++ +E V D F+
Sbjct: 13 VLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFNQRDFSRLNEFK 72
Query: 540 AGCFDGAVSVSAIQWLFNADKKTH 469
G FD + + + N+D + +
Sbjct: 73 -GHFDTVIDIGCFHSILNSDHEPY 95
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 447 KFFTTLYSSLSRSARAVFQFYPENEKQLELLTTQAMKAGFYGGVVID 307
+F +LYSS+S +F+ K L L+ +GGV+++
Sbjct: 25 EFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLLE 71
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 416 QGLLELSSNFTLRMKSN 366
Q L E +SNFTLR K+N
Sbjct: 428 QRLFEFTSNFTLRRKAN 444
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 482 SALNNHCIADTDTAPSKQPALNGTPSPISARTKPPSVSLSTATSS 616
S L++ + + ++PS + T S +S + P + S S++TSS
Sbjct: 208 SYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSS 252
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 708 LLDIGCGSGLSGTVXEENGHMWIGMDISSSMLDVA 604
+LDIGCG G+ G +D S ++VA
Sbjct: 81 ILDIGCGGGILSESMARLGASVTAVDASPMAIEVA 115
>SPAC12G12.10 |||WD repeat protein, human WDR21
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 420
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -2
Query: 306 YPNSAKAKKFFLVLMTGGVGPLPQALGTEE-PDSLQVKYAKREATKGIRGKPIKNSKDWI 130
Y NS K K++F ++ +G P E + +E TKG G P+ N ++
Sbjct: 12 YYNSEK-KRYFRIISSGQSTPSSNIYTKERLKRGKRFNNISKERTKGKGGNPVFNFSTYL 70
Query: 129 LEKK 118
+++
Sbjct: 71 FDRQ 74
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 506 ADTDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIP 640
A+ AP+ TP+ + PP +S S+ T +D S+P
Sbjct: 396 ANNFLAPTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLP 440
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 542 LNGTPSPISARTKPPSVSLST 604
+ G PSP + T PP +S+ST
Sbjct: 229 VKGHPSPATVTTLPPFMSMST 249
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 536 PALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSXTVPDNPEPHPISNNKH 715
P T S + + S+S S++TSS SIPI S +P + + S++
Sbjct: 62 PISTHTSSATNTTSGQLSISSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSSTT 121
Query: 716 D 718
D
Sbjct: 122 D 122
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 687 SGLSGTVXEENGHMWIGMDISSSM 616
+ +GTV + NG++ G+D SSS+
Sbjct: 217 ASFTGTVYDSNGNVIKGLDTSSSL 240
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 518 TAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIP 640
T + P ++ T S S + PSV+LST++++ + S P
Sbjct: 299 TTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTP 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,973,409
Number of Sequences: 5004
Number of extensions: 61097
Number of successful extensions: 280
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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