Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_N13
         (371 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical ...   144   1e-35
L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical pr...    32   0.15 
Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical pr...    30   0.61 
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical pr...    26   9.9  
Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical pr...    26   9.9  
U00034-1|AAA50639.2|  566|Caenorhabditis elegans Pim (mammalian ...    26   9.9  
AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical ...    26   9.9  

>AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical
           protein Y106G6H.3 protein.
          Length = 113

 Score =  144 bits (350), Expect = 1e-35
 Identities = 68/93 (73%), Positives = 77/93 (82%)
 Frame = -3

Query: 282 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKXEI 103
           M  A K +K  E+INSRL++VMK+G+Y LGYKQTLK+L  GKAKLVIIA N PPLRK EI
Sbjct: 1   MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60

Query: 102 EYYAXLAKTGVHHYSGNNIEXGTACGKDDRVCT 4
           EYYA LAKTGVHHY+GNNIE GTACG+  RVCT
Sbjct: 61  EYYAMLAKTGVHHYNGNNIELGTACGRLFRVCT 93


>L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical
           protein ZK686.1 protein.
          Length = 44

 Score = 31.9 bits (69), Expect = 0.15
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -3

Query: 225 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 130
           +VMK+G+Y L Y+Q LK+L    AKLVI  K+
Sbjct: 1   MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31


>Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical
           protein LLC1.3 protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 0.61
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 309 GFISIYAPKMVAAKKQKKTIESINSRLALV 220
           GF +I  P  V AKK   ++E+IN+R  L+
Sbjct: 138 GFATIVGPNTVQAKKNDGSVETINARNILI 167


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 147 PALLCLVEEFSKFACILSNIFPISSP 224
           PAL    EEFSKF  +L  I+P   P
Sbjct: 290 PALNLDSEEFSKFVTLLYAIYPAIDP 315


>Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical
           protein T01H3.2 protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 252 WSFSVSLLQPFWERKC 299
           W +S+S L P W+++C
Sbjct: 140 WQYSLSFLAPKWDKQC 155


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  HSVVFSACCSXFNVVPAVVVHTC 78
           +S + + CC  +N  P + V+TC
Sbjct: 908 YSCIQNQCCPSYNSAPRISVYTC 930


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  HSVVFSACCSXFNVVPAVVVHTC 78
           +S + + CC  +N  P + V+TC
Sbjct: 250 YSCIQNQCCPSYNSAPRISVYTC 272


>Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical
           protein K04H4.2a protein.
          Length = 628

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  HSVVFSACCSXFNVVPAVVVHTC 78
           +S + + CC  +N  P + V+TC
Sbjct: 250 YSCIQNQCCPSYNSAPRISVYTC 272


>Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical
           protein F53H4.4 protein.
          Length = 275

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
 Frame = -3

Query: 303 ISIYAPKMVAAKKQKKTIESINSRLALVM------KSGKYCLGYKQTLKTLRQGKAKLVI 142
           +S   P M A K + + +   N RLA+ M      +SG Y     Q  ++LR       +
Sbjct: 171 LSKLTPSMFAEKARPRRVRERNGRLAVRMSRISWNRSGLYYNAIIQFFESLRG-----TV 225

Query: 141 IAKNAPPLRKXEIEYYAXLAKTGVH 67
           I +   PL +  + Y   L  T  H
Sbjct: 226 ITQGEQPLCEKSVTYQEMLKHTLAH 250


>Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical
           protein DH11.2 protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 258 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVI 142
           KT++ IN  + L       C G+++ L+ L++   KL +
Sbjct: 182 KTLQEINLDIVLSDNEDVTCAGFRELLRFLKEISYKLTV 220


>U00034-1|AAA50639.2|  566|Caenorhabditis elegans Pim (mammalian
           oncogene) relatedkinase protein 1, isoform a protein.
          Length = 566

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 286 GSVNANESSPRAQMEKKRLKTHRPAEF 366
           GS+   ES PR++    R+  HRP +F
Sbjct: 517 GSLQCFESVPRSRDSVIRMSRHRPLQF 543


>AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical
           protein Y59C2A.2 protein.
          Length = 440

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = -2

Query: 250 RVN*LPPCFGDEIGKILLRIQANFENS 170
           R++    CFGD++ ++++R+   +E++
Sbjct: 306 RIDSKSQCFGDQLARLMMRLFVGYEDT 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,462,290
Number of Sequences: 27780
Number of extensions: 151823
Number of successful extensions: 386
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)