Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_N11
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0216 + 10370531-10371922,10378656-10378808 33 0.17
03_05_0186 + 21731294-21732277 31 0.51
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 31 0.68
06_03_0557 + 22133604-22134506 30 0.90
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 29 1.6
12_02_0637 - 21437244-21438080 29 2.7
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 29 2.7
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 29 2.7
10_02_0198 - 6611775-6612611 29 2.7
10_01_0334 - 3680612-3681266,3682253-3682374 29 2.7
10_01_0300 - 3257584-3258825 29 2.7
07_01_1086 - 9930311-9931993 29 2.7
11_03_0201 + 11578163-11578915 28 3.6
08_02_0235 + 14627648-14628889 28 3.6
08_01_0397 - 3509186-3510291,3510322-3512335 28 3.6
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 28 3.6
11_01_0366 + 2793732-2793838,2793944-2794979 28 4.8
04_01_0187 - 2153546-2154520,2154581-2155858 28 4.8
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 28 4.8
02_05_1082 - 33976038-33978035 28 4.8
09_02_0555 - 10588685-10592038 27 6.3
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 27 6.3
05_01_0214 - 1615519-1616775 27 6.3
03_05_0182 - 21679813-21680127 27 6.3
01_06_0604 + 30536172-30537143 27 6.3
12_02_0214 + 15750620-15751273 27 8.4
10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798 27 8.4
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 27 8.4
08_01_0749 + 7063297-7064370 27 8.4
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 27 8.4
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 32.7 bits (71), Expect = 0.17
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIE----VNGKQLTVTIDRL 335
+V+LR PLR L P ++GPYK++ RRG ++ +E + G + +L
Sbjct: 400 YVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQL 459
Query: 334 KPAYITRDDGKREDKQKTSEASEEHQRPVQKTRSGRTVT 218
K T K S QRP ++ GR T
Sbjct: 460 KKCLRTEPQTKPYPLDMWKYGSALQQRPEDRSLYGRGAT 498
>03_05_0186 + 21731294-21732277
Length = 327
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
HV+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 267 HVYLRVTPLRGVYRFHTKGKLAPRFVGPYKIVSRRGEVAYQLEL 310
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR+ L P ++GPYK+L RRG ++ +E+
Sbjct: 353 YVYLRVTPLRRVHRFQTKGKLAPRFMGPYKILERRGEVAYQLEL 396
>06_03_0557 + 22133604-22134506
Length = 300
Score = 30.3 bits (65), Expect = 0.90
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -3
Query: 493 ELNTTSHVFLRQGPLRK--------SLEPPYIGPYKV-LRRGSKSFDIEV 371
E HV+LR PLR L P YIGPY + RRG ++ +E+
Sbjct: 159 EFEEGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGVVAYQLEL 208
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 171 TVASSCHGYLSADLRARIR*CVR 103
+VA+SC+GYL ADL+A R R
Sbjct: 68 SVAASCNGYLGADLQALCREAAR 90
>12_02_0637 - 21437244-21438080
Length = 278
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 132 YVYLRVTPLRGVHRFHTMGKLAPRFVGPYKIVSRRGEVAYQLEL 175
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 435 YVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLEL 478
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 178 YVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLEL 221
>10_02_0198 - 6611775-6612611
Length = 278
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 132 YVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLEL 175
>10_01_0334 - 3680612-3681266,3682253-3682374
Length = 258
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = -1
Query: 246 KRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRARIR*CVRAPIRSQRAAALX 67
+RR A S +RT RS+RS RG+ C+ R R R R A+
Sbjct: 126 RRRVRAQPSAARTLAGRSWRSPRGAGSGRGCYR----------RGGSREGRRGARGASAA 175
Query: 66 QVTPGCCAG 40
GCC G
Sbjct: 176 AAVDGCCGG 184
>10_01_0300 - 3257584-3258825
Length = 413
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 267 YVYLRVTPLRGVHHFHTNGKLAPRFVGPYKIVSRRGEVAYQLEL 310
>07_01_1086 - 9930311-9931993
Length = 560
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK++ RRG ++ +E+
Sbjct: 414 YVYLRVTPLRGVHCFHTKGKLAPRFVGPYKIVRRRGEVAYQLEL 457
>11_03_0201 + 11578163-11578915
Length = 250
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GPYK+L +RG ++ +E+
Sbjct: 104 YVYLRVTPLRGVHRFQIKGKLAPRFVGPYKILEQRGEVAYQLEL 147
>08_02_0235 + 14627648-14628889
Length = 413
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -3
Query: 451 LRKSLEPPYIGPYKVL-RRGSKSFDIEV 371
++ L P ++GPYK++ RRG ++ +E+
Sbjct: 283 IKGKLAPRFVGPYKIVSRRGEVAYQLEL 310
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 318 RETMAREKTNRRPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGST 169
RE +EK R RR + + RR A +DR + RR S+
Sbjct: 76 REEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRDRKRRRRSS 125
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 171 TVASSCHGYLSADLRARIR*CVR 103
+VA+SC+GY+ ADL+A R R
Sbjct: 156 SVAASCNGYVGADLQALCREAAR 178
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 273 RAKNISVQYKRR-EAAVQSPSRTTIDRSYRSRRGSTVASSCH 151
R+KN++V + + A + T D+ + + G TVA+ CH
Sbjct: 183 RSKNVTVLLDQTVDLAAAAAGANTDDKVFTTSAGETVAADCH 224
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR P+R L P ++GPYK++ RRG ++ +E+
Sbjct: 650 YVYLRVTPIRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLEL 693
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -1
Query: 315 ETMAREKTNRRP-ARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLS 139
E ARE+ R + ++ S +Y R + V SP + RSY SSC +
Sbjct: 122 EMRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSSCFAGDT 181
Query: 138 ADLRARIR*CVRAPIRSQ 85
R VR PI +Q
Sbjct: 182 DKFMILCRKSVRMPIEAQ 199
>02_05_1082 - 33976038-33978035
Length = 665
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 254 TLMFFARLAGLLFVFSLAIVSRDIGRF 334
+LM A LAG++FV L V RD+ R+
Sbjct: 304 SLMVIAFLAGIVFVILLRTVRRDLTRY 330
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Frame = -3
Query: 493 ELNTTSHVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
E V+LR PLR L P Y+GP++++ RRG ++ +E+
Sbjct: 965 EFAVDDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARRGEVAYQLEL 1014
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 9/45 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEVN 368
+V+LR PLR L P ++GP+K++ RRG ++ +E++
Sbjct: 1530 YVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELS 1574
>05_01_0214 - 1615519-1616775
Length = 418
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 362 TINCHHRSPKTCLYHARRWQERRQTEDQRGERRTSASSTKDEKR------PYSHLPG-LL 204
T+N HH P T +H + +++ ++ A K +R Y H+ G +
Sbjct: 232 TVNLHHH-PGTGHHHHDAEEPLLKSDAGCDSTQSGAKDAKKARRNINVHSAYLHVLGDSI 290
Query: 203 STVAIGLGGGVLWHHP 156
++ + +GG ++W+ P
Sbjct: 291 QSIGVMIGGAIIWYKP 306
>03_05_0182 - 21679813-21680127
Length = 104
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 334 KPAYITRDDGKREDKQKTSEASEEHQRPVQKTR 236
KP Y+T+ K D+ EAS++ Q +K R
Sbjct: 26 KPRYVTKQRAKIMDQDSKMEASDKKQEESEKWR 58
>01_06_0604 + 30536172-30537143
Length = 323
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -2
Query: 374 GKWQTINCHHRSPKTCLYHARRWQERRQTEDQR----GERRTSASSTKDEK 234
G+W+ C +P RW+ER +R RR +SS+ D++
Sbjct: 129 GEWEGRKCPPSTPFAAAPPLARWKERASVSSRRLSTHSSRRLMSSSSSDDE 179
>12_02_0214 + 15750620-15751273
Length = 217
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GP+K++ RRG ++ +E+
Sbjct: 71 YVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLEL 114
>10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798
Length = 244
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 299 RRQTEDQRGERRTSASSTKDEKRPYSHLPGLLSTVAIGLGGG 174
RR+ + + ER A + +RP S P +L+ I +GGG
Sbjct: 114 RRRLDVEHDERAVRAEAEVVGRRPLSSSPLVLTPACICVGGG 155
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 323 YHARRWQERRQTEDQRGERRTSASSTKDEKRPYSH 219
YH + +Q R+ + + + AS+TK K YS+
Sbjct: 12 YHVKYYQVRKMMRNNQNTQVEGASATKKRKTSYSN 46
>08_01_0749 + 7063297-7064370
Length = 357
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Frame = -3
Query: 475 HVFLRQGPLRK--------SLEPPYIGPYKVL-RRGSKSFDIEV 371
+V+LR PLR L P ++GP+K++ RRG ++ +E+
Sbjct: 211 YVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLEL 254
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 343 DRLKPAYITRDDGKREDKQKTSEASEEHQRPVQKTRSGRTVTFPDYY 203
DR+K R DGKR + E S + RP K + + P ++
Sbjct: 230 DRIKERSERRTDGKRNSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHF 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,907,298
Number of Sequences: 37544
Number of extensions: 336128
Number of successful extensions: 1353
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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