Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_N11
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical ... 31 0.46
AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical ... 31 0.46
AF078790-3|AAC26933.1| 380|Caenorhabditis elegans Hypothetical ... 30 0.81
AC006681-4|AAK85495.1| 380|Caenorhabditis elegans Hypothetical ... 30 0.81
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 28 3.3
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 28 3.3
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 28 4.3
U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical pr... 28 4.3
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 27 5.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 7.6
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 7.6
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 27 7.6
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 7.6
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 7.6
U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical pr... 27 10.0
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF022968-4|AAB69886.2| 458|Caenorhabditis elegans Hypothetical ... 27 10.0
AF022968-3|AAV28363.1| 482|Caenorhabditis elegans Hypothetical ... 27 10.0
>AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical
protein Y19D10A.9 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -2
Query: 434 TTIHWP---LQSLKKRIEIVRH*--GKWQTINCHHRSPKTCLYHARRW 306
TT++W + K + H GKWQTI HH P C Y + +
Sbjct: 98 TTMYWSNFNMNHAKDNNYVAEHTTDGKWQTIGKHHELPFVCSYDPKNF 145
>AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical
protein F56A4.2 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -2
Query: 434 TTIHWP---LQSLKKRIEIVRH*--GKWQTINCHHRSPKTCLYHARRW 306
TT++W + K + H GKWQTI HH P C Y + +
Sbjct: 98 TTMYWSNFNMNHAKDNNYVAEHTTDGKWQTIGKHHELPFVCSYDPKNF 145
>AF078790-3|AAC26933.1| 380|Caenorhabditis elegans Hypothetical
protein F36H12.9 protein.
Length = 380
Score = 30.3 bits (65), Expect = 0.81
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -3
Query: 454 PLRKSLEPPYIGPYKVLRRGSKSFDIEVNGKQLTVTIDRLKPAYITRDDGKREDKQKTS 278
PL E PY+GP + G K D+EV G T + + D R+ K+KTS
Sbjct: 311 PLDWDPETPYMGPIEQPGDG-KVIDLEVEGGASTKDFSKRNAKEKDQSDETRKGKKKTS 368
>AC006681-4|AAK85495.1| 380|Caenorhabditis elegans Hypothetical
protein R13H9.6 protein.
Length = 380
Score = 30.3 bits (65), Expect = 0.81
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -3
Query: 454 PLRKSLEPPYIGPYKVLRRGSKSFDIEVNGKQLTVTIDRLKPAYITRDDGKREDKQKTS 278
PL E PY+GP + G K D+EV G T + + D R+ K+KTS
Sbjct: 311 PLDWDPETPYMGPIEQPGDG-KVIDLEVEGGASTKDFSKRNAKEKDQSDETRKGKKKTS 368
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 332 TCLYHARRWQERRQTE---DQRGERRTSASST 246
+C+Y + W ERRQ E DQ ER S ST
Sbjct: 191 SCVYGSGTWSERRQYEEPFDQVSERTISICST 222
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 332 TCLYHARRWQERRQTE---DQRGERRTSASST 246
+C+Y + W ERRQ E DQ ER S ST
Sbjct: 191 SCVYGSGTWSERRQYEEPFDQVSERTISICST 222
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 452 PPKVARTTIHWPLQSLKK 399
P K+ T IHWP ++LKK
Sbjct: 330 PSKINNTWIHWPQKNLKK 347
>U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical
protein F53B1.8 protein.
Length = 809
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 197 RSIVVREGDCTAASRLLYWTLMFFARLAGLLFVFSLAIVS 316
R +V++G C L W L+ FA L+ F ++ I+S
Sbjct: 658 RPRIVKKGVCEPQCTELLWFLLLFAPLSFCTFAIAVPIIS 697
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 397 GSKSFDIEVNGKQLTVTIDRLKPAYITRDDGKREDKQKTSEASEE 263
G+K+ D+E+ KQL ++LK I R+ G + K SE+ E
Sbjct: 359 GAKNLDLELELKQLKEKQNKLKSG-IQRNRGDKNTVSKMSESLRE 402
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 203 STVAIGLGGGVLWHHP 156
+TV G GG LWHHP
Sbjct: 3546 TTVESGSGGEELWHHP 3561
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 203 STVAIGLGGGVLWHHP 156
+TV G GG LWHHP
Sbjct: 3578 TTVESGSGGEELWHHP 3593
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 203 STVAIGLGGGVLWHHP 156
+TV G GG LWHHP
Sbjct: 1392 TTVESGSGGEELWHHP 1407
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 245 LYWTLMFFARLAGLLFVFSLAIVSRDIGRF 334
L++TL+F A +L+ FS+++ RD RF
Sbjct: 326 LWFTLLFVASTLDMLYWFSISMFHRDRFRF 355
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 203 STVAIGLGGGVLWHHP 156
+TV G GG LWHHP
Sbjct: 3578 TTVESGSGGEELWHHP 3593
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 203 STVAIGLGGGVLWHHP 156
+TV G GG LWHHP
Sbjct: 3578 TTVESGSGGEELWHHP 3593
>U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical
protein F48A9.1 protein.
Length = 339
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 343 DRLKPAYITRDDGKREDKQKTSEASEEHQRPVQKTRSGRTVT 218
DR K RD+ KRE++Q + H+R R +V+
Sbjct: 220 DRRKDTEELRDERKRENEQNQNRERYHHRRSKSSNRDDASVS 261
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 316 RDDGKREDKQKTSEASEEHQRPVQKTRSGRT 224
+DD K +DK+K++ SE+ + +KT ++
Sbjct: 270 KDDKKEDDKEKSATKSEDKKSDEKKTEEKKS 300
>AF022968-4|AAB69886.2| 458|Caenorhabditis elegans Hypothetical
protein C10F3.4a protein.
Length = 458
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 404 KKRIEIVRH*GKWQTINCHH--RSPKTCLYHAR--RWQERRQTEDQRGERRTSASSTKDE 237
KK ++ + H +W+ ++ P C+Y ++ Q +RGE R K+
Sbjct: 70 KKALKELLH-ERWENAKQYNAFNYPLNCMYRCLDGKYDLSMQLNIERGELRRKPMHFKNI 128
Query: 236 KRPYSHL 216
K P++HL
Sbjct: 129 KEPFNHL 135
>AF022968-3|AAV28363.1| 482|Caenorhabditis elegans Hypothetical
protein C10F3.4b protein.
Length = 482
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 404 KKRIEIVRH*GKWQTINCHH--RSPKTCLYHAR--RWQERRQTEDQRGERRTSASSTKDE 237
KK ++ + H +W+ ++ P C+Y ++ Q +RGE R K+
Sbjct: 94 KKALKELLH-ERWENAKQYNAFNYPLNCMYRCLDGKYDLSMQLNIERGELRRKPMHFKNI 152
Query: 236 KRPYSHL 216
K P++HL
Sbjct: 153 KEPFNHL 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,636,721
Number of Sequences: 27780
Number of extensions: 246172
Number of successful extensions: 1007
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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