Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_N08
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1070 + 33872845-33873726 143 1e-34
09_04_0126 + 14874739-14875581 139 2e-33
08_02_0807 + 21411799-21412665 138 3e-33
04_04_1644 + 35015849-35016838 92 3e-19
10_08_0036 + 14325793-14326457,14326610-14328035 67 1e-11
10_08_0041 - 14374684-14377339,14377371-14378233 64 7e-11
06_01_0276 + 2035763-2036770 63 2e-10
10_08_0032 - 14288522-14290465 59 3e-09
07_01_0499 - 3738959-3740068 54 1e-07
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657 50 2e-06
10_01_0149 + 1745355-1746230 44 1e-04
10_01_0124 - 1504521-1505303 44 1e-04
09_02_0090 - 4147108-4147191,4147629-4147697,4148089-4148343,414... 32 0.49
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 30 2.0
12_02_0707 - 22330267-22330872,22331154-22332870,22335417-22335634 29 4.5
08_02_0184 + 13947739-13947930,13948289-13948465,13948546-139486... 29 4.5
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 28 6.0
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 28 6.0
07_01_0583 + 4338003-4338377,4338455-4338647,4338734-4339326 28 6.0
05_03_0658 + 16711117-16712337 28 7.9
>02_05_1070 + 33872845-33873726
Length = 293
Score = 143 bits (347), Expect = 1e-34
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = -2
Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
ELLMSSG+VL D++ W++FH+GYDFGYLLK+LT +LP + FF+ +++YFPTVYD+K+
Sbjct: 162 ELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLMKIYFPTVYDIKH 221
Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSSGHL 325
LMK C +L GGL ++A+ L++ RVG HQAGSDS +T A F + E +G L
Sbjct: 222 LMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLKDSFFAGSTEKYAGVL 281
Query: 324 YGLGA 310
YGL A
Sbjct: 282 YGLNA 286
>09_04_0126 + 14874739-14875581
Length = 280
Score = 139 bits (337), Expect = 2e-33
Identities = 65/124 (52%), Positives = 87/124 (70%)
Frame = -2
Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
ELLMSSG+V+ ++W++FHSGYDFGYLLKLLT LP FF+ +R+YFP VYD+K+
Sbjct: 146 ELLMSSGVVMNSEVRWVTFHSGYDFGYLLKLLTGTYLPDTITGFFDLIRIYFPVVYDIKH 205
Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSSGHL 325
LM+ C +L GGL ++A+ L++ RVG HQAGSDS LT ++ F+ E +G L
Sbjct: 206 LMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSFKKLKEAYFNGLTEKYAGVL 265
Query: 324 YGLG 313
YGLG
Sbjct: 266 YGLG 269
>08_02_0807 + 21411799-21412665
Length = 288
Score = 138 bits (335), Expect = 3e-33
Identities = 66/130 (50%), Positives = 89/130 (68%)
Frame = -2
Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
ELLMSSG+VL +++W++FHSGYDFGYLL+LLT +NLP + FF+ +R+YFP +YD+K+
Sbjct: 150 ELLMSSGVVLNADVQWITFHSGYDFGYLLRLLTGRNLPDNMPAFFDLIRIYFPVLYDIKH 209
Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSSGHL 325
LM+ C NL GGL + + L+++RVG HQAGSDS LT F + E +G L
Sbjct: 210 LMRFCSNLHGGLSRLGELLDVKRVGTCHQAGSDSLLTLGCYNKIKEVYFKGSTEKHAGVL 269
Query: 324 YGLGAPFSVN 295
YGL VN
Sbjct: 270 YGLVIEDGVN 279
>04_04_1644 + 35015849-35016838
Length = 329
Score = 92.3 bits (219), Expect = 3e-19
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Frame = -2
Query: 681 LLMSSGLVLXDN-IKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYF-PTVYDVK 508
LLMSSGLV +KW++FHS YDF YL+KLL + LP+ +F +R++F VYDVK
Sbjct: 183 LLMSSGLVCSHGAVKWVTFHSAYDFAYLVKLLMGRKLPRSMAEFLNLVRVFFGDEVYDVK 242
Query: 507 YLMKLC-KNLKGGLQEVADQLELRR-VGPQHQAGSDSHLT-GMAXXXXXXXXFDDNIESS 337
++M+ C L GGL+ VA L+++R G HQA SDS LT + +E+
Sbjct: 243 HMMRHCGGELYGGLERVAAALQVKRAAGRCHQAASDSLLTWDVFRRMRELYFLKHGVEAY 302
Query: 336 SGHLYGL 316
G L+GL
Sbjct: 303 QGVLFGL 309
>10_08_0036 + 14325793-14326457,14326610-14328035
Length = 696
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -2
Query: 648 NIKWLSFHSGYDFGYLLKLLT-----DQNLPQDENDFFESLRLYFPTVYDVKYLMKLCKN 484
++ W+++H YDFG+ L+LL +LP + F LRL FP +YD++ L +L ++
Sbjct: 308 SVTWIAYHGDYDFGFFLRLLQGGCRGSSHLPLELPTFLHQLRLNFPRLYDIRVLGQLVQH 367
Query: 483 -LKGGLQEVADQLELRRVGPQHQAGSDSHLT 394
+G L +AD L + R G H AG D+ LT
Sbjct: 368 GFRGSLTAIADLLGVNRFGRGHHAGVDALLT 398
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = -2
Query: 681 LLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLT-DQNLPQDENDFFESLRLYFPTVYDVKY 505
L+ S G N+ W++FH + L+ + Q+LP D + E R YFP +YDV
Sbjct: 553 LMASCGATSNPNVSWVTFHGAHGIASLISSFSAPQDLPSDWPSYVEQRRAYFPGMYDVAL 612
Query: 504 LMKLCKNL--------KGGLQEVADQLEL 442
++ ++ KGGL +VA L+L
Sbjct: 613 IVHRYPDIGILPTTGCKGGLFDVARALDL 641
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = -2
Query: 648 NIKWLSFHSGYDFGYLLKLLTDQN------LPQDENDFFESLRLYFPTVYDVKYLMKLCK 487
++ W++FH YD +LL+LL + LP F + +R FP VYDV+ L KL K
Sbjct: 791 SVTWVAFHGDYDLAFLLRLLQGGDHGGNCLLPPKLATFLQKVREKFPVVYDVRVLGKLVK 850
Query: 486 N-LKGGLQEVADQLELRRVGPQHQAGSDSHLT 394
+ G L +A+ L + R G +H AGSD+ LT
Sbjct: 851 DGFNGSLTALAEYLGIPRNGDEHHAGSDALLT 882
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Frame = -2
Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLK-LLTDQNLPQDENDFFESLRLYFPTVYDVK 508
+ + S G + NI W++FH + +++ L+ Q+LP + R +FP +YDV
Sbjct: 1032 KFMASCGALGDPNISWVTFHGAHGIARMIRSFLSPQDLPSQWCSYIGHRRAFFPAIYDVA 1091
Query: 507 YLMKLCKNL--------KGGLQEVADQLELRRVGPQHQA 415
L++ ++ KGGL +VA L L+ + +A
Sbjct: 1092 LLVRRSFDIITIPWIECKGGLLDVAQALNLKEIEADMEA 1130
>06_01_0276 + 2035763-2036770
Length = 335
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = -2
Query: 645 IKWLSFHSGYDFGYLLKLLT-DQNLPQDENDFFESL-RLYFPTVYDVKYLMKLC---KNL 481
+ W +F YDF YL+K+LT + LP F + +++ P V DVK+L K C +
Sbjct: 209 LTWAAFSGSYDFAYLVKVLTGGRPLPSTLEGFMAKVSKIFGPAVLDVKHLAKFCGGGGGI 268
Query: 480 KGGLQEVADQLELRR-VGPQHQAGSDSHLT 394
+GGL+ VA L + R G H AGSDS LT
Sbjct: 269 RGGLEHVAAALGVHRAAGRAHNAGSDSLLT 298
>10_08_0032 - 14288522-14290465
Length = 647
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -2
Query: 648 NIKWLSFHSGYDFGYLLKLLT-------DQNLPQDENDFFESLRLYFPTVYDVKYLMKLC 490
++ WL++HS YD G+LL+LL +LP+ F LR FP YDV+ + ++
Sbjct: 306 SVTWLAYHSDYDLGFLLRLLQCGGRRRGGGDLPRQLAAFLRRLRENFPAFYDVRVIRQML 365
Query: 489 KN--LKGGLQEVADQLELRRV-GPQHQAGSDSHLT 394
++ G L +A+ L +RR G H AGSD+ LT
Sbjct: 366 EDHGFSGKLTGLAEHLGIRRTGGAAHHAGSDALLT 400
>07_01_0499 - 3738959-3740068
Length = 369
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Frame = -2
Query: 636 LSFHSGYDFGYLLKLLTD-----QNLPQDENDFFESLRLYFP-TVYDVKYLMKLCK-NLK 478
++F YD Y+LK+L LP D F +R T+YDV + + C +++
Sbjct: 244 VTFSGAYDLAYMLKMLYGGGGGGYRLPGDAATFEFVVRAVIGRTLYDVGKMARHCPGDMR 303
Query: 477 GGLQEVADQLELRR-VGPQHQAGSDSHLTGMAXXXXXXXXFDD 352
GGL+ VA +L +RR VG HQAGSDS LT FDD
Sbjct: 304 GGLERVAGKLGVRRAVGEAHQAGSDSLLTSQMFMRMRERYFDD 346
>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
Length = 1032
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = -2
Query: 648 NIKWLSFHSGYDFGYLLKLLT-------DQNLPQDENDFFESLRLYFPTVYDVKYLMKLC 490
++ WL++H YD +LL LL +LP+ F LR FP YDV+ +
Sbjct: 691 SVTWLAYHGDYDLSFLLHLLQRGGRRRGGGDLPRQLATFLRRLRENFPAFYDVRADAE-D 749
Query: 489 KNLKGGLQEVADQLELRRV-GPQHQAGSDSHLT 394
G L +A+ L +RR G H AGSD+ LT
Sbjct: 750 HGFSGKLTGLAEHLGIRRTGGAAHHAGSDALLT 782
>10_01_0149 + 1745355-1746230
Length = 291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -2
Query: 678 LMSSGLVLXDNIKWLSFHSGYDFGYLLKLLT-DQNLPQDENDFFESLRLYFPT-VYDVKY 505
L +SG++ + W++F YD +LL+L T LP F + F T V+D K+
Sbjct: 166 LAASGILGLRGVTWVAFGGMYDVAFLLRLATGGAPLPATRLGFLAQVGAVFGTQVFDAKH 225
Query: 504 LMKLCKNLKGGLQEVADQLELRRVGP-QHQAGSDS 403
+ L ++ GGL V L L P +H AG +S
Sbjct: 226 MASLL-HMHGGLAAVGGMLRLPPQLPRRHMAGQNS 259
>10_01_0124 - 1504521-1505303
Length = 260
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = -2
Query: 645 IKWLSFHSGYDFGYLLKLLT-DQNLPQDENDFFESL--RLYFPTVYDVKYLMKLCKN--L 481
+ W +F YD GYLLK+LT Q LP+ F + + RL ++D KYL++ +
Sbjct: 148 LTWSAFGGAYDMGYLLKMLTGGQPLPETRQQFMQLVKSRLGGGRIFDSKYLVEHDRQDLR 207
Query: 480 KGGLQEVADQLELRR 436
GL+ AD L +R+
Sbjct: 208 NAGLRHTADVLGVRQ 222
>09_02_0090 -
4147108-4147191,4147629-4147697,4148089-4148343,
4148701-4148865,4149000-4149044,4149193-4149267,
4149397-4149573,4149680-4149904,4150058-4150183
Length = 406
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -2
Query: 516 DVKYLMKLCKNL-KGGLQEVADQLELRRV 433
D+KY++++CKNL L EV D+ EL RV
Sbjct: 253 DIKYMLRICKNLGMTALIEVHDERELDRV 281
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 516 DVKYLMKLCKNL-KGGLQEVADQLELRRV 433
D+KY++K+CK L L EV D+ E+ RV
Sbjct: 267 DIKYMLKICKILGMAALVEVHDEREMDRV 295
>12_02_0707 - 22330267-22330872,22331154-22332870,22335417-22335634
Length = 846
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 489 KNLKGGLQEVADQLELRRVGPQHQAGSDS 403
K L GG++ ++D LEL GPQ + D+
Sbjct: 382 KKLPGGIECISDMLELSTTGPQLEQFKDT 410
>08_02_0184 +
13947739-13947930,13948289-13948465,13948546-13948665,
13948709-13948753,13948848-13949012,13949324-13949402,
13949552-13949631,13950548-13950616,13950948-13951031
Length = 336
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 516 DVKYLMKLCKNL-KGGLQEVADQLELRRV 433
D+KY +++CK L L EV D+ E+ RV
Sbjct: 215 DIKYFLRICKELGMTALIEVHDEREMERV 243
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 648 NIKWLSFHSGYDFGYLLKLL 589
++ W+++H YD +LL+LL
Sbjct: 474 SVTWVAYHGDYDLAFLLRLL 493
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 492 TASSNI*HRKQLENTVEDSQKSHSHLAVGSDLLAILINSQSHIQS 626
+A N RK+L + + DSQKS SH V SD ++ +Q +QS
Sbjct: 603 SAFRNSEKRKELAHVLSDSQKSVSH--VLSDSQKSVLAAQDEVQS 645
>07_01_0583 + 4338003-4338377,4338455-4338647,4338734-4339326
Length = 386
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 212 CGECLDTHADSADQEEFPFSP 274
CG C + D +D EEF F P
Sbjct: 82 CGSCFNGGGDGSDDEEFDFLP 102
>05_03_0658 + 16711117-16712337
Length = 406
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 621 GYDFGYLLKLLTDQNLPQDENDFFESL--RLYFPTVYDVKYLMK 496
G + L+KLLT++N+P D ++ + + PT++ +MK
Sbjct: 238 GRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMK 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,703,480
Number of Sequences: 37544
Number of extensions: 318894
Number of successful extensions: 790
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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