Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_N08
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L46722-1|AAF01500.1|  262|Homo sapiens BTG1 binding factor 1 pro...   190   3e-48
BC070187-1|AAH70187.1|  285|Homo sapiens CCR4-NOT transcription ...   190   3e-48
BC060852-1|AAH60852.1|  285|Homo sapiens CCR4-NOT transcription ...   190   3e-48
AF086915-1|AAP97145.1|  285|Homo sapiens CAF1 protein.                190   3e-48
BT006857-1|AAP35503.1|  292|Homo sapiens CCR4-NOT transcription ...   184   3e-46
BC017366-1|AAH17366.1|  292|Homo sapiens CNOT8 protein protein.       184   3e-46
AF180476-1|AAF29830.1|  292|Homo sapiens CALIFp protein.              184   3e-46
AF087844-1|AAP97157.1|  292|Homo sapiens CAF2 protein.                184   3e-46
AK025358-1|BAB15119.1|  292|Homo sapiens protein ( Homo sapiens ...   183   6e-46
AF053318-1|AAD02685.1|  292|Homo sapiens CCR4-associated factor ...   178   1e-44
BT006685-1|AAP35331.1|  246|Homo sapiens CCR4-NOT transcription ...   172   1e-42
BC007315-1|AAH07315.1|  246|Homo sapiens CNOT7 protein protein.       172   1e-42
BC012001-1|AAH12001.1|  191|Homo sapiens CEACAM21 protein protein.     31   5.0  

>L46722-1|AAF01500.1|  262|Homo sapiens BTG1 binding factor 1
           protein.
          Length = 262

 Score =  190 bits (464), Expect = 3e-48
 Identities = 88/127 (69%), Positives = 106/127 (83%), Gaps = 2/127 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 115 ELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 174

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 175 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCG 234

Query: 330 HLYGLGA 310
           HLYGLG+
Sbjct: 235 HLYGLGS 241


>BC070187-1|AAH70187.1|  285|Homo sapiens CCR4-NOT transcription
           complex, subunit 7 protein.
          Length = 285

 Score =  190 bits (464), Expect = 3e-48
 Identities = 88/127 (69%), Positives = 106/127 (83%), Gaps = 2/127 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 138 ELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCG 257

Query: 330 HLYGLGA 310
           HLYGLG+
Sbjct: 258 HLYGLGS 264


>BC060852-1|AAH60852.1|  285|Homo sapiens CCR4-NOT transcription
           complex, subunit 7 protein.
          Length = 285

 Score =  190 bits (464), Expect = 3e-48
 Identities = 88/127 (69%), Positives = 106/127 (83%), Gaps = 2/127 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 138 ELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCG 257

Query: 330 HLYGLGA 310
           HLYGLG+
Sbjct: 258 HLYGLGS 264


>AF086915-1|AAP97145.1|  285|Homo sapiens CAF1 protein.
          Length = 285

 Score =  190 bits (464), Expect = 3e-48
 Identities = 88/127 (69%), Positives = 106/127 (83%), Gaps = 2/127 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 138 ELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCG 257

Query: 330 HLYGLGA 310
           HLYGLG+
Sbjct: 258 HLYGLGS 264


>BT006857-1|AAP35503.1|  292|Homo sapiens CCR4-NOT transcription
           complex, subunit 8 protein.
          Length = 292

 Score =  184 bits (448), Expect = 3e-46
 Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN+KWLSFHSGYDFGY++KLLTD  LP++E++FF  L L+FP++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>BC017366-1|AAH17366.1|  292|Homo sapiens CNOT8 protein protein.
          Length = 292

 Score =  184 bits (448), Expect = 3e-46
 Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN+KWLSFHSGYDFGY++KLLTD  LP++E++FF  L L+FP++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>AF180476-1|AAF29830.1|  292|Homo sapiens CALIFp protein.
          Length = 292

 Score =  184 bits (448), Expect = 3e-46
 Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN+KWLSFHSGYDFGY++KLLTD  LP++E++FF  L L+FP++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>AF087844-1|AAP97157.1|  292|Homo sapiens CAF2 protein.
          Length = 292

 Score =  184 bits (448), Expect = 3e-46
 Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN+KWLSFHSGYDFGY++KLLTD  LP++E++FF  L L+FP++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>AK025358-1|BAB15119.1|  292|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21705 fis, clone COL09940. ).
          Length = 292

 Score =  183 bits (445), Expect = 6e-46
 Identities = 86/138 (62%), Positives = 107/138 (77%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN++WLSFHSGYDFGY++KLLTD  LP++E++FF  L L+FP++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVRWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>AF053318-1|AAD02685.1|  292|Homo sapiens CCR4-associated factor 1
           protein.
          Length = 292

 Score =  178 bits (434), Expect = 1e-44
 Identities = 85/138 (61%), Positives = 105/138 (76%), Gaps = 2/138 (1%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM+SG+VL DN+KWLSFHSGYDFGY++KLLTD  LP++E++F   L L+ P++YDVKY
Sbjct: 138 ELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFLHILNLFSPSIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAXXXXXXXXFDDNIESSS--G 331
           LMK CKNLKGGLQEVADQL+L+R+G QHQAGSDS LTGMA        F+D+I+ +   G
Sbjct: 198 LMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCG 257

Query: 330 HLYGLGAPFSVNVNNFQD 277
            LYGLG   +   N   D
Sbjct: 258 RLYGLGTGVAQKQNEDVD 275


>BT006685-1|AAP35331.1|  246|Homo sapiens CCR4-NOT transcription
           complex, subunit 7 protein.
          Length = 246

 Score =  172 bits (418), Expect = 1e-42
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 138 ELLMISGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMA 385
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTG A
Sbjct: 198 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGNA 237


>BC007315-1|AAH07315.1|  246|Homo sapiens CNOT7 protein protein.
          Length = 246

 Score =  172 bits (418), Expect = 1e-42
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = -2

Query: 684 ELLMSSGLVLXDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENDFFESLRLYFPTVYDVKY 505
           ELLM SG+VL + +KWLSFHSGYDFGYL+K+LT+ NLP++E DFFE LRL+FP +YDVKY
Sbjct: 138 ELLMISGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKY 197

Query: 504 LMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMA 385
           LMK CKNLKGGLQEVA+QLEL R+GPQHQAGSDS LTG A
Sbjct: 198 LMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGNA 237


>BC012001-1|AAH12001.1|  191|Homo sapiens CEACAM21 protein protein.
          Length = 191

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 113 HLSSFXLNQLIFYNLL*LYQNLSIYSLR*NMRSCGECLDTHADSADQEEFPFSPLSWKL 289
           H  +  L    +YNL   Y+N  I     ++R  GEC    ++ ++   +P     W L
Sbjct: 108 HFQNVTLEDTGYYNLQVTYRNSQIEQASHHLRVYGECSKFDSEISEDAAWPQDTFCWSL 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,820,005
Number of Sequences: 237096
Number of extensions: 1838267
Number of successful extensions: 3259
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3255
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)