Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M24
         (344 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121061-1|AAI21062.1|  783|Homo sapiens patched domain containi...    29   5.2  
AK054858-1|BAB70816.1|  783|Homo sapiens protein ( Homo sapiens ...    29   5.2  
BX248244-13|CAM26094.1|  241|Homo sapiens chromosome 6 open read...    28   6.8  
BX248244-10|CAM26093.1|  237|Homo sapiens chromosome 6 open read...    28   6.8  
BC113721-1|AAI13722.1|  222|Homo sapiens chromosome 6 open readi...    28   6.8  
BC113719-1|AAI13720.1|  222|Homo sapiens chromosome 6 open readi...    28   6.8  
BA000025-18|BAB63378.1|  241|Homo sapiens G6B protein.                 28   6.8  
AL844216-10|CAM45771.1|  241|Homo sapiens chromosome 6 open read...    28   6.8  
AL844216-7|CAM45768.1|  237|Homo sapiens chromosome 6 open readi...    28   6.8  
AL670886-44|CAI17816.2|  241|Homo sapiens chromosome 6 open read...    28   6.8  
AL670886-42|CAI17815.1|  237|Homo sapiens chromosome 6 open read...    28   6.8  
AL662899-30|CAI18409.2|  241|Homo sapiens chromosome 6 open read...    28   6.8  
AL662899-26|CAI18408.1|  237|Homo sapiens chromosome 6 open read...    28   6.8  
AJ431212-1|CAD24050.1|   77|Homo sapiens truncated steroid 21-hy...    28   6.8  
AJ292265-1|CAC83501.1|  222|Homo sapiens G6b-G protein protein.        28   6.8  
AJ292264-1|CAC83500.1|  225|Homo sapiens G6b-F protein protein.        28   6.8  
AJ292260-1|CAC83496.1|  241|Homo sapiens G6b-B protein protein.        28   6.8  
AJ292259-1|CAC83497.1|  237|Homo sapiens G6b-A protein protein.        28   6.8  
AJ012008-3|CAB46080.1|  241|Homo sapiens immunoglobulin receptor...    28   6.8  
AF129756-4|AAD18075.1|  241|Homo sapiens G6b protein.                  28   6.8  

>BC121061-1|AAI21062.1|  783|Homo sapiens patched domain containing
           1 protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 4   FRCTLFCXSLRRFAPCSSVRWGXLPFFPPSKEKCSDRHN 120
           FRC LF  +   F  C ++    L F PPSK+K  ++ N
Sbjct: 719 FRC-LFLIAFVTFFHCFAILPVILTFLPPSKKKRKEKKN 756


>AK054858-1|BAB70816.1|  783|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30296 fis, clone BRACE2003110, weakly similar to
           PATCHED PROTEIN HOMOLOG 1. ).
          Length = 783

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 4   FRCTLFCXSLRRFAPCSSVRWGXLPFFPPSKEKCSDRHN 120
           FRC LF  +   F  C ++    L F PPSK+K  ++ N
Sbjct: 719 FRC-LFLIAFVTFFHCFAILPVILTFLPPSKKKRKEKKN 756


>BX248244-13|CAM26094.1|  241|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>BX248244-10|CAM26093.1|  237|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>BC113721-1|AAI13722.1|  222|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>BC113719-1|AAI13720.1|  222|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>BA000025-18|BAB63378.1|  241|Homo sapiens G6B protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL844216-10|CAM45771.1|  241|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL844216-7|CAM45768.1|  237|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL670886-44|CAI17816.2|  241|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL670886-42|CAI17815.1|  237|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL662899-30|CAI18409.2|  241|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AL662899-26|CAI18408.1|  237|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AJ431212-1|CAD24050.1|   77|Homo sapiens truncated steroid
           21-hydroxylase protein.
          Length = 77

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 141 IALGAMAVVAVGTFLFTWWKERKVPPP 61
           + L  + ++A    L+ WWK R +PPP
Sbjct: 4   LGLLLLPLLAGARLLWNWWKLRSLPPP 30


>AJ292265-1|CAC83501.1|  222|Homo sapiens G6b-G protein protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AJ292264-1|CAC83500.1|  225|Homo sapiens G6b-F protein protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AJ292260-1|CAC83496.1|  241|Homo sapiens G6b-B protein protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AJ292259-1|CAC83497.1|  237|Homo sapiens G6b-A protein protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AJ012008-3|CAB46080.1|  241|Homo sapiens immunoglobulin receptor
           protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


>AF129756-4|AAD18075.1|  241|Homo sapiens G6b protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 135 LGAMAVVAVGTFLFTWWKERKVPP 64
           LGA  V+ +G     WW  R++PP
Sbjct: 148 LGAGLVLGLGALGLVWWLHRRLPP 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,075,009
Number of Sequences: 237096
Number of extensions: 960622
Number of successful extensions: 2147
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2147
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)