Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M24
         (344 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    27   8.7  
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    27   8.7  

>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
           protein.
          Length = 2175

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 183 NSNSQGSNTSAANAIALGAMAVVAVGT 103
           N NS+ S+T+AA A A    AVVA  T
Sbjct: 65  NLNSENSDTAAAAATAAAVAAVVAGAT 91


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
           isoform A protein.
          Length = 2175

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 183 NSNSQGSNTSAANAIALGAMAVVAVGT 103
           N NS+ S+T+AA A A    AVVA  T
Sbjct: 65  NLNSENSDTAAAAATAAAVAAVVAGAT 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,233,581
Number of Sequences: 53049
Number of extensions: 313890
Number of successful extensions: 705
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)