Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M15
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68301-7|CAA92627.2|  364|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U21322-4|AAA62540.2|  508|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AC024815-1|ABB88220.1|  344|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z68301-7|CAA92627.2|  364|Caenorhabditis elegans Hypothetical
           protein W01B6.6 protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
 Frame = -2

Query: 558 QKEPQS*EEPAKQ--TQRVYNTSTISD--LKLTLPKPTCMVY*ISRNNPK 421
           +KE  S +E AK+      +NTSTI+    +L+ PKP+  +  I +NNPK
Sbjct: 67  EKEQWSGDETAKKLVASGAFNTSTITSGFKELSNPKPSADMCSIFKNNPK 116


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 683 DHNNXTDSSIQIQNHLFQLRCQ-HNTLVECQNINNNVNSTTGSKKSHSPEKNRRNKLSGY 507
           D N      +QI   L + + + H+T     N+++N N TT +   ++   N  +  S Y
Sbjct: 206 DTNKSEPEFVQIARRLRRFQPEIHDTFANVTNVSSNTNVTTTTTTINNNNNNNIHINSSY 265

Query: 506 TIQA 495
           +++A
Sbjct: 266 SLKA 269


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 683 DHNNXTDSSIQIQNHLFQLRCQ-HNTLVECQNINNNVNSTTGSKKSHSPEKNRRNKLSGY 507
           D N      +QI   L + + + H+T     N+++N N TT +   ++   N  +  S Y
Sbjct: 249 DTNKSEPEFVQIARRLRRFQPEIHDTFANVTNVSSNTNVTTTTTTINNNNNNNIHINSSY 308

Query: 506 TIQA 495
           +++A
Sbjct: 309 SLKA 312


>U21322-4|AAA62540.2|  508|Caenorhabditis elegans Hypothetical
           protein K10D2.2 protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 331 IKHQMHIFCCFTTRIAFDRFSNLREIFSTR 242
           ++ Q+H+  CF  R+  D + + R  F TR
Sbjct: 153 LEMQVHLSACFGCRVVLDIYGSTRNGFGTR 182


>AC024815-1|ABB88220.1|  344|Caenorhabditis elegans Hypothetical
           protein Y54F10BL.1 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 379 DISLSLSHARVTDYDVIKHQMHIF--CCFTTRIAF-DRFSNLREIF 251
           D+ + L HA   ++DVI +++ IF  C  +  I F + F+ L E F
Sbjct: 107 DLKILLKHASCIEFDVIAYKVPIFNICICSNDIYFVESFAPLLECF 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,934,862
Number of Sequences: 27780
Number of extensions: 284553
Number of successful extensions: 791
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)