Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_M11
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 3.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 7.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 9.6
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 9.6
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 9.6
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 9.6
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 654 IPYICKPSQNSAFPNLVKIVTDFKLFQECKIFT 752
I I K + FP+ +KI++ K QE IFT
Sbjct: 346 IEIIVKDPETLQFPSGMKIISSKKDRQELWIFT 378
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.0 bits (47), Expect = 3.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 648 WRIPYICKPSQNSAF 692
WR PY+C + AF
Sbjct: 5 WRFPYLCYKNGGGAF 19
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 648 WRIPYICKPSQNSAF 692
WR PY+C + AF
Sbjct: 43 WRFPYLCYKNGGGAF 57
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 646 SIWGLLF*ELSVFITIKQMFCSLGIKLFGMSSEELNLVRK 527
SIW LF + + I + FC++ + E L+RK
Sbjct: 374 SIWSCLFFFMLILIGLDSQFCTVEGFITAAVDEWPRLLRK 413
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 648 WRIPYICKPSQNSAF 692
WR PY+C + AF
Sbjct: 96 WRFPYLCYKNGGGAF 110
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 646 SIWGLLF*ELSVFITIKQMFCSLGIKLFGMSSEELNLVRK 527
SIW LF + + I + FC++ + E L+RK
Sbjct: 427 SIWSCLFFFMLILIGLDSQFCTVEGFITAAVDEWPRLLRK 466
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 7.3
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +2
Query: 158 KRNITLVSEFYCNMLVTTLKLQSANL*CYSYRRKTSQTILIISMN 292
+R ++ +E YCN+ ++ +A L Y R+T +++ +N
Sbjct: 530 RRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESVAAERLN 574
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 7.3
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +2
Query: 158 KRNITLVSEFYCNMLVTTLKLQSANL*CYSYRRKTSQTILIISMN 292
+R ++ +E YCN+ ++ +A L Y R+T +++ +N
Sbjct: 498 RRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESVAAERLN 542
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 506 GYIFI*IKKRVHTVFDLDY 450
GY+ + ++T+F+LDY
Sbjct: 370 GYVNSALNPLIYTIFNLDY 388
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 506 GYIFI*IKKRVHTVFDLDY 450
GY+ + ++T+F+LDY
Sbjct: 370 GYVNSALNPLIYTIFNLDY 388
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 506 GYIFI*IKKRVHTVFDLDY 450
GY+ + ++T+F+LDY
Sbjct: 370 GYVNSALNPLIYTIFNLDY 388
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 64 ENRTREMKQRDERERHKK 11
E + +EM+Q ERER ++
Sbjct: 63 EQQRKEMEQMREREREQR 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,864
Number of Sequences: 438
Number of extensions: 3825
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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