Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M09
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    31   0.011
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 153 SIVDLKKKTHNVHXLWSLVD 94
           SI+DL ++T+NVH +WS  D
Sbjct: 279 SIIDLSQQTYNVHLMWSKPD 298


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 466 PYVSASRFNPVSVKETSSHDC-TVKGTNGR 552
           PYV+ S ++P S+     + C T K  NG+
Sbjct: 854 PYVNGSEYHP-SIVSLGEYKCVTCKCENGK 882


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 122 LCVFFFKSTID*GNEFF*HLLNALKY*LFYII 217
           + +FFF + +  G  +F  LLN +   + ++I
Sbjct: 540 ITIFFFTANVQAGELYFMSLLNPILSNVTFVI 571


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 122 LCVFFFKSTID*GNEFF*HLLNALKY*LFYII 217
           + +FFF + +  G  +F  LLN +   + ++I
Sbjct: 265 ITIFFFTANVQAGELYFMSLLNPILSNVTFVI 296


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +2

Query: 74  FHSNHLKSTSDHXL 115
           +H+NH+  T++H +
Sbjct: 52  YHANHVNPTANHVM 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,258
Number of Sequences: 336
Number of extensions: 2670
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)