Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_M08
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 106 8e-24
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 106 8e-24
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 106 8e-24
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 104 2e-23
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 104 2e-23
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 103 4e-23
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 103 4e-23
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 103 4e-23
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 103 4e-23
U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine rec... 28 3.3
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 26 10.0
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 26 10.0
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 106 bits (254), Expect = 8e-24
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI ++
Sbjct: 335 GYIATR 340
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 106 bits (254), Expect = 8e-24
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI ++
Sbjct: 335 GYIATR 340
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 106 bits (254), Expect = 8e-24
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI ++
Sbjct: 335 GYIATR 340
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 104 bits (250), Expect = 2e-23
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI ++
Sbjct: 335 GYIATR 340
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 104 bits (250), Expect = 2e-23
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI ++
Sbjct: 335 GYIATR 340
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 103 bits (248), Expect = 4e-23
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI +K
Sbjct: 335 SYIATK 340
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 103 bits (248), Expect = 4e-23
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI +K
Sbjct: 335 SYIATK 340
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 103 bits (248), Expect = 4e-23
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI +K
Sbjct: 335 SYIATK 340
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 103 bits (248), Expect = 4e-23
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -2
Query: 415 PADCILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 236
P IL YTEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI
Sbjct: 275 PMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLI 334
Query: 235 KYIQSK 218
YI +K
Sbjct: 335 SYIATK 340
>U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine
receptor, class w protein71 protein.
Length = 353
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 13 FCDFVKYLNIANHFYKYFL 69
FCD + +L IA + Y+YF+
Sbjct: 64 FCDLIVFLTIAQNRYRYFI 82
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 139 IFKPIDNLDVHVEKYPYIHTFDQEFN 216
IF PI VH +IHTFD++FN
Sbjct: 192 IFVPILEA-VHSGNLEFIHTFDKKFN 216
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 173 LKNILTFIHLIKSLIFRLNVLDEINDSAGITIFIVVPTDQLHKVVI 310
LKN F HL L+ + + EI D +G I I + Q K +
Sbjct: 17 LKNNSFFEHLFNFLVKNTHGITEIRDESGRIIEISIKVPQKEKCAV 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,389,315
Number of Sequences: 27780
Number of extensions: 147725
Number of successful extensions: 332
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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