Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_M07
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0933 + 9193382-9193384,9194159-9194317,9194398-9194574 110 1e-24
08_01_0932 + 9185388-9185411,9185512-9185784,9185919-9185987 51 8e-07
05_03_0182 + 9332280-9332363,9334212-9334286,9334390-9334437,933... 48 7e-06
11_06_0335 + 22441240-22441548,22441958-22442028,22442321-224423... 46 2e-05
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 42 5e-04
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 40 0.002
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 36 0.031
04_04_0598 - 26514226-26514545,26516080-26516302 35 0.070
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 34 0.093
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 34 0.093
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 33 0.22
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 33 0.22
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 32 0.50
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 31 0.66
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 30 1.5
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 30 2.0
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 30 2.0
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 30 2.0
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 29 2.6
06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 29 2.6
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 29 2.6
01_01_0604 - 4493868-4494028,4494538-4494746,4495860-4496003,449... 29 2.6
07_01_1118 - 10316298-10316710,10316789-10317264,10317397-103177... 29 3.5
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020... 29 4.6
01_01_0710 + 5492389-5492745,5493664-5493948,5494121-5494438,549... 29 4.6
12_02_0826 + 23485853-23486055,23486747-23487755 28 6.1
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 28 6.1
>08_01_0933 + 9193382-9193384,9194159-9194317,9194398-9194574
Length = 112
Score = 110 bits (264), Expect = 1e-24
Identities = 51/96 (53%), Positives = 73/96 (76%)
Frame = -1
Query: 556 IVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLG 377
++D HL ILAK+H+ETRFVK+ E+APFLT +L+I V+PTL LVK+ K +D++VGF +LG
Sbjct: 2 VMDKHLSILAKQHVETRFVKVHAEKAPFLTEKLRIVVLPTLALVKNTKVEDYVVGFDELG 61
Query: 376 NRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQ 269
+DDFST+ LE R+A+++ I G+ P+ A KQ
Sbjct: 62 GKDDFSTEDLEERLAKAQVIFLDGE---GPAHASKQ 94
>08_01_0932 + 9185388-9185411,9185512-9185784,9185919-9185987
Length = 121
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = -1
Query: 682 EWLAIGHGEYTEIDGEKEFFAVCNKSQNVVCHXYKSDSPRCKI 554
+W A+GHGEY E+ EKEFFA S +VCH Y+ + P CK+
Sbjct: 60 KWRALGHGEYGEVP-EKEFFAAAKASDRLVCHFYRDNWP-CKV 100
>05_03_0182 +
9332280-9332363,9334212-9334286,9334390-9334437,
9334513-9334596,9334905-9334966,9335109-9335206,
9335281-9335390
Length = 186
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -1
Query: 487 ERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 344
E APF +L I+ +P + L K D ++GF DLG++DDFST LE
Sbjct: 97 ENAPFFVTKLGIKTLPCVILFKKGIAADRLIGFQDLGSKDDFSTRALE 144
>11_06_0335 +
22441240-22441548,22441958-22442028,22442321-22442381,
22443252-22443326,22443431-22443478,22443565-22443666,
22443971-22444032,22444187-22444284,22444361-22444470
Length = 311
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -1
Query: 487 ERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 344
+ APF +L I+ +P + L K D +VGF DLG++DDFST LE
Sbjct: 222 KNAPFFVTKLGIKTLPCVILFKKGIAVDRLVGFQDLGSKDDFSTRALE 269
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = -1
Query: 691 QXQEWLAIGHGEYTEIDGEKEFFAVCNKSQN----VVCHXYKSDSPRCKIVDMHLKILAK 524
+ Q+ +G+ + +++ E+ + N++ N VV H S ++ + LA+
Sbjct: 2 EIQQQKGVGNSKVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELAQ 61
Query: 523 KHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
H E F+ +DV+ ++ +L ++ +PT L+KD + + IVG
Sbjct: 62 THPEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVG 105
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
C+I+ LAKKH F+K+DV+ + + + +PT +K+ KD +VG
Sbjct: 49 CRIIAPVFADLAKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVG 105
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = -1
Query: 622 AVCNKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVI 443
A + S+ VV + + C+ + K LA+KH F+K+D++ + R + +
Sbjct: 654 AASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSV 713
Query: 442 PTLGLVKDNKTKDFIVG 392
P+ V++ K D +VG
Sbjct: 714 PSFFFVRNGKEIDKVVG 730
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHI-ETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
CK++D + L+K++ + + KL+ + P + + +R IPT+ + K+ + KD ++G
Sbjct: 106 CKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIG 163
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 34.3 bits (75), Expect = 0.093
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHI-ETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
CK++D + L+K++ + KL+ + P + + IR IPT+ + K+ + KD ++G
Sbjct: 139 CKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIG 196
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 34.3 bits (75), Expect = 0.093
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -1
Query: 661 GEYTEIDGEKEFFAVCNKS--QNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDV 488
G+ TE++ + F+ + + + VV Y CK++ + +++K + F+KLD
Sbjct: 80 GQVTEVNKDT-FWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKFQEMSEKDQDVVFLKLDC 138
Query: 487 ERA-PFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
+ L L I+V+PT ++KD K + G
Sbjct: 139 NQDNKSLAKELGIKVVPTFKILKDGKVVKEVTG 171
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 565 RCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDN-KTKDFI 398
+C ++ + L + F+K++VE +P + +R++PT + KD K K+ I
Sbjct: 617 QCTLITPSVNSLCSECPSLNFLKVNVEDSPMVAKAENVRIVPTFKIYKDGVKVKEMI 673
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -1
Query: 661 GEYTEIDGEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVER 482
GE I G ++F + V H + +C + + L ++ F+K+D+
Sbjct: 568 GEVEAITGMEQFQMATSLPGVSVIHFMTPLNQQCCKISPFVNTLCTRYPSISFLKVDISE 627
Query: 481 APFLTGRLKIRVIPTLGLVKD-NKTKDFI 398
+P + +R +PT + K+ + K+ I
Sbjct: 628 SPAVARAENVRTVPTFKIYKNGTRVKEMI 656
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIV 395
C+ ++ K +A + + F K+DV+ + + K+ +PT L+K K +V
Sbjct: 59 CRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEYQALV 114
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTD 383
C+ + AKK F+K+DV+ + + + +PT +KD D +VG
Sbjct: 43 CRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVG--- 99
Query: 382 LGNRDDFSTDILE 344
+DD I++
Sbjct: 100 -ARKDDLQNTIVK 111
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -1
Query: 613 NKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTL 434
N ++ VV S CK+++ K +A + + F+K+DV+ + ++ +PT
Sbjct: 41 NTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTF 100
Query: 433 GLVKDNKTKDFIVG 392
L + + IVG
Sbjct: 101 VLARGGEEVGRIVG 114
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 464 TGQKRRSLHVQLHEPRLDVLLGQDLE--VHVHDLAAGRVRLVXMAHDILTFIANSKELFL 637
TG + H P+ D+++ L+ V V D+ A R + V A DIL + +LF
Sbjct: 132 TGHNHYVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFG 190
Query: 638 SIDLCVFSVTNG 673
+D V V G
Sbjct: 191 GVDAVVKYVLEG 202
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 464 TGQKRRSLHVQLHEPRLDVLLGQDLE--VHVHDLAAGRVRLVXMAHDILTFIANSKELFL 637
TG + H P+ D+++ L+ V V D++A R + V A DIL + +LF
Sbjct: 132 TGHNHYVMCASFH-PKEDLVVSASLDQTVRVWDISALRKKSVSPADDILRLTQMNTDLFG 190
Query: 638 SIDLCVFSVTNG 673
+D V V G
Sbjct: 191 GVDAVVKYVLEG 202
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 464 TGQKRRSLHVQLHEPRLDVLLGQDLE--VHVHDLAAGRVRLVXMAHDILTFIANSKELFL 637
TG + H P+ D+++ L+ V V D+ A R + V A DIL + +LF
Sbjct: 132 TGHNHYVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFG 190
Query: 638 SIDLCVFSVTNG 673
+D V V G
Sbjct: 191 GVDAVVKYVLEG 202
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 640 GEKEFFAVCNKS--QNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKL 494
GE+ F + NKS Q + H Y C + DM L ++ IE FVK+
Sbjct: 462 GERYFTELINKSMIQPIEHHLYLGTVDGCHVHDMVLDLIRLLAIEENFVKV 512
>06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053
Length = 1613
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = -1
Query: 679 WLAIG-----HGEYTEIDGEKEFFAVCNKSQ-NVVCHXYKSDSPRCKIVDMHLKILAKKH 518
W+A G HG E GE+ F ++S ++V + CK+ D+ L+++ K
Sbjct: 1132 WIAEGFVTQRHGLSMEQVGERYFDEFVSRSMVHLVRIDWSGKVRSCKVHDIMLEVIVSKS 1191
Query: 517 IETRFVKLDVERAPFLTGRLKIR 449
+E F + L KIR
Sbjct: 1192 LEENFASFFCDNGTELVSHDKIR 1214
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -1
Query: 562 CKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 392
C+++ ++K + + F+ +DV+ + IR PT +K+ K D +VG
Sbjct: 59 CRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVG 115
>01_01_0604 -
4493868-4494028,4494538-4494746,4495860-4496003,
4496298-4496539
Length = 251
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 598 VVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVK-LDVERAPFLTGRLKIRVIPTLGLVK 422
VV YK P C ++ L LA ++ T+FVK + + P R +PT+ +
Sbjct: 121 VVVFLYKDGIPECGLLQTCLDELATRYPATKFVKIISTDCIP----NYPDRNVPTILVYN 176
Query: 421 DNKTKDFIVGFTDLGNR 371
++ K VG G +
Sbjct: 177 NSAVKGTYVGLQKFGGK 193
>07_01_1118 -
10316298-10316710,10316789-10317264,10317397-10317735,
10317798-10317895,10319007-10319045
Length = 454
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 568 PRCKIVDMHLKILAKKHIETRFVKL 494
P+C++ DM L I K +E+ FV+L
Sbjct: 226 PKCRVHDMMLDITVSKALESNFVRL 250
>11_06_0228 +
21497248-21498143,21499831-21501700,21501934-21502038,
21502139-21502232,21502335-21502363
Length = 997
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = -1
Query: 640 GEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKL-DV--ERAPFL 470
GE+ F + NKS + + S C+I DM L ++ K E FVK+ D E
Sbjct: 493 GERYFIELINKSMIQPIEEFCNVSG-CRIHDMVLDLIRKIATEGNFVKVFDKLHEMHGLS 551
Query: 469 TGRLKIRVIPTLGLVKDNKTKDFIVGFTDL 380
+ R IR I K D VG T L
Sbjct: 552 SQRTTIRRIALHKSWNQGKNNDLAVGMTHL 581
>01_01_0710 +
5492389-5492745,5493664-5493948,5494121-5494438,
5494900-5495127,5495884-5495984,5496493-5496604,
5496654-5496662,5496897-5497340,5497649-5497909
Length = 704
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -3
Query: 578 VGLAPLQDRGHAPQDLGQEAHRDEVREVGRGESAVSDRSA*NTRDPNPRTSEGQQ 414
+G+ ++ G A + + R+E E R +A +A R P PR EG+Q
Sbjct: 32 MGVGMVRREGEARKVQARVGGREEAAERRRAAAAAMAMAACRVRSPVPRAVEGEQ 86
>12_02_0826 + 23485853-23486055,23486747-23487755
Length = 403
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 330 LAILHSSISVEKSSLLPRSVKPTMKSLVLLSFTSPRVGITRILSR 464
+AI H++ S+ ++PR+ T K V +S T+ +G I++R
Sbjct: 212 VAIFHTTTSIGAREIIPRAGPRTSKP-VAISHTATSIGAREIIAR 255
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 565 RCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDN-KTKDFI 398
+C+ + + L + F+K++V+ +P + +R++P+ + KD + K+ I
Sbjct: 630 QCQQITPSVDSLCSECPSVNFLKVNVDESPMVARAENVRIVPSFKIYKDGARMKEMI 686
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,372,726
Number of Sequences: 37544
Number of extensions: 372554
Number of successful extensions: 992
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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