Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M07
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-9|AAB53824.1|  208|Caenorhabditis elegans Hypothetical pr...   133   1e-31
AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical ...    41   0.001
AF125951-4|AAT68898.1|  342|Caenorhabditis elegans Hypothetical ...    41   0.001
U23168-7|AAC38808.1|  115|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U23168-6|AAP86623.1|  114|Caenorhabditis elegans Hypothetical pr...    30   1.4  
DQ241300-1|ABB45864.1|  114|Caenorhabditis elegans TRX-1b protein.     30   1.4  
DQ241299-1|ABB45863.1|  115|Caenorhabditis elegans TRX-1a protein.     30   1.4  
AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL132865-5|CAB60597.1|  258|Caenorhabditis elegans Hypothetical ...    28   7.3  
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U00048-9|AAB53824.1|  208|Caenorhabditis elegans Hypothetical
           protein C05D11.3 protein.
          Length = 208

 Score =  133 bits (322), Expect = 1e-31
 Identities = 62/126 (49%), Positives = 86/126 (68%)
 Frame = -1

Query: 694 KQXQEWLAIGHGEYTEIDGEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHI 515
           K   E L+ GHG+Y E+  EKEFF    KS  VVC  Y   + RCKIVD H +ILA+KH+
Sbjct: 55  KDRIEMLSHGHGKYEEVADEKEFFEATKKSDKVVCLFYLPGNFRCKIVDKHFEILARKHV 114

Query: 514 ETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRI 335
            TRF+ ++ E+  FLT RL IRVIP++ +V   +T D+I GF +LG +D+F+T+ +E R+
Sbjct: 115 GTRFIHVNAEKVHFLTTRLNIRVIPSIAIVVKQQTVDYIRGFDELGGKDEFTTETMENRL 174

Query: 334 ARSEAI 317
           ARSE +
Sbjct: 175 ARSEVL 180


>AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical
           protein D2063.3a protein.
          Length = 345

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -1

Query: 649 EIDGEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 473
           EI   +E  A   +    V H Y S +P C+ V+  L  +LA+  +  R   +D E  P 
Sbjct: 5   EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64

Query: 472 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 389
           ++   KI   PTL    + K  D I GF
Sbjct: 65  ISLNFKITAAPTLVFFSNGKEVDRIDGF 92


>AF125951-4|AAT68898.1|  342|Caenorhabditis elegans Hypothetical
           protein D2063.3b protein.
          Length = 342

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -1

Query: 649 EIDGEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 473
           EI   +E  A   +    V H Y S +P C+ V+  L  +LA+  +  R   +D E  P 
Sbjct: 5   EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64

Query: 472 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 389
           ++   KI   PTL    + K  D I GF
Sbjct: 65  ISLNFKITAAPTLVFFSNGKEVDRIDGF 92


>U23168-7|AAC38808.1|  115|Caenorhabditis elegans Hypothetical
           protein B0228.5a protein.
          Length = 115

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -1

Query: 598 VVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 419
           ++   Y +    CK +    K LA  H    F K+DV+ A  L  +  ++++PT    K+
Sbjct: 30  IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89

Query: 418 NKTKDFIVG 392
               + + G
Sbjct: 90  GDAIEALEG 98


>U23168-6|AAP86623.1|  114|Caenorhabditis elegans Hypothetical
           protein B0228.5b protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -1

Query: 598 VVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 419
           ++   Y +    CK +    K LA  H    F K+DV+ A  L  +  ++++PT    K+
Sbjct: 29  IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88

Query: 418 NKTKDFIVG 392
               + + G
Sbjct: 89  GDAIEALEG 97


>DQ241300-1|ABB45864.1|  114|Caenorhabditis elegans TRX-1b protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -1

Query: 598 VVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 419
           ++   Y +    CK +    K LA  H    F K+DV+ A  L  +  ++++PT    K+
Sbjct: 29  IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88

Query: 418 NKTKDFIVG 392
               + + G
Sbjct: 89  GDAIEALEG 97


>DQ241299-1|ABB45863.1|  115|Caenorhabditis elegans TRX-1a protein.
          Length = 115

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -1

Query: 598 VVCHXYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 419
           ++   Y +    CK +    K LA  H    F K+DV+ A  L  +  ++++PT    K+
Sbjct: 30  IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89

Query: 418 NKTKDFIVG 392
               + + G
Sbjct: 90  GDAIEALEG 98


>AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical
           protein Y44E3A.3 protein.
          Length = 107

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -1

Query: 643 DGEKEFFAVCNKSQNVVCHXYKSDSPRCKIVDMHLKILAKKHIET-RFVKLDVERAPFLT 467
           D  K  FA   K+Q V+     S    C+++   ++ LA +H +    +K+DV+    + 
Sbjct: 9   DEFKTIFAE-KKTQPVILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECDGVG 67

Query: 466 GRLKIRVIPTLGLVKDNKTKDFIVG 392
              +I  +PT  L+ D   KD   G
Sbjct: 68  EEYEINSMPTFLLIVDGIKKDQFSG 92


>AL132865-5|CAB60597.1|  258|Caenorhabditis elegans Hypothetical
           protein Y62E10A.8 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -1

Query: 694 KQXQEWLAIGHGEYTEIDGEKEFF-AVCNKSQNVVCHX-YKSDSPRCKIVDMHLKILAKK 521
           K+ +E   I      E+  +K++  AV   S  ++C   Y+ +S  C+ +   +KILA  
Sbjct: 115 KRLREMRKIAANRVIEMTDKKQYSDAVDGSSSYLLCVLIYEPESDECEYLTRIVKILAAD 174

Query: 520 HIETRFVK 497
             +T+FV+
Sbjct: 175 CPKTKFVR 182


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 415 KTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQ 269
           K KD+   F     RDD    + EW     E       L  PP E KK+
Sbjct: 408 KVKDY--AFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQEKKKK 454


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,295
Number of Sequences: 27780
Number of extensions: 318613
Number of successful extensions: 825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)