Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_M04
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 401 e-111
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 401 e-111
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 401 e-111
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 401 e-111
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 400 e-111
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 400 e-111
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 400 e-111
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 399 e-111
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 396 e-110
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 260 5e-69
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 1e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 206 5e-53
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 178 1e-44
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 165 2e-40
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.27
U05321-1|AAB60375.1| 613|Homo sapiens X-linked PEST-containing ... 34 0.62
U05315-1|AAB60374.1| 598|Homo sapiens X-linked PEST-containing ... 34 0.62
AL157934-1|CAI40762.2| 613|Homo sapiens solute carrier family 1... 34 0.62
AB085789-1|BAC76827.1| 539|Homo sapiens X-linked PEST-containin... 34 0.62
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 401 bits (987), Expect = e-111
Identities = 198/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 400 bits (985), Expect = e-111
Identities = 195/234 (83%), Positives = 208/234 (88%), Gaps = 2/234 (0%)
Frame = -1
Query: 698 ISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 519
ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 518 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 339
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 338 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 159
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 158 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 237
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 400 bits (985), Expect = e-111
Identities = 195/234 (83%), Positives = 208/234 (88%), Gaps = 2/234 (0%)
Frame = -1
Query: 698 ISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 519
ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 518 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 339
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 338 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 159
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 158 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 237
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 400 bits (984), Expect = e-111
Identities = 197/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISK+RKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 399 bits (983), Expect = e-111
Identities = 197/239 (82%), Positives = 211/239 (88%), Gaps = 2/239 (0%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 238
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 194/232 (83%), Positives = 206/232 (88%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 354
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 353 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 174
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 173 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAP 18
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKP 231
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 260 bits (636), Expect = 5e-69
Identities = 125/153 (81%), Positives = 133/153 (86%), Gaps = 2/153 (1%)
Frame = -1
Query: 455 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 276
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 275 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 96
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 95 DHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
DH+ + EPKDE +P P SE + P P +PQ
Sbjct: 121 DHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 153
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 1e-58
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = -1
Query: 527 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 348
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 347 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 168
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 167 LGIKVKI 147
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 206 bits (504), Expect = 5e-53
Identities = 104/118 (88%), Positives = 110/118 (93%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 360
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 178 bits (434), Expect = 1e-44
Identities = 85/112 (75%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
Frame = -1
Query: 332 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 153
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 152 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQ 3
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQ
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQ 112
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 165 bits (400), Expect = 2e-40
Identities = 83/96 (86%), Positives = 88/96 (91%)
Frame = -1
Query: 713 MAVNNISKKRKFVGDGVFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 534
MAV ISKKRKFV DG+FKAELNEFL RELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 533 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 426
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.1 bits (77), Expect = 0.27
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 189 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 49
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>U05321-1|AAB60375.1| 613|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = -1
Query: 140 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 3
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 88 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 140
>U05315-1|AAB60374.1| 598|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = -1
Query: 140 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 3
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 73 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 125
>AL157934-1|CAI40762.2| 613|Homo sapiens solute carrier family 16,
member 2 (monocarboxylic acid transporter 8) protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = -1
Query: 140 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 3
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 88 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 140
>AB085789-1|BAC76827.1| 539|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = -1
Query: 140 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 3
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 14 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,337,315
Number of Sequences: 237096
Number of extensions: 2592347
Number of successful extensions: 15380
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15349
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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