Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_M03
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0088 + 19633641-19634228 33 0.065
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 29 1.8
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 28 3.2
03_02_0310 + 7315185-7316820,7318332-7318879 28 3.2
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 28 3.2
08_01_0965 + 9739150-9739557 27 4.3
07_03_1596 - 28012392-28012799 27 4.3
06_01_0904 - 6964715-6965245,6965432-6965488,6965680-6965721,696... 27 4.3
05_01_0434 - 3438978-3439237,3439638-3439908,3440078-3440232,344... 27 4.3
02_01_0051 - 385738-385968,386439-386864 27 4.3
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 27 4.3
04_04_0765 - 27910189-27912393,27912521-27912598 27 5.6
12_02_1233 + 27224219-27225607 27 7.5
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 27 7.5
04_03_0974 + 21367304-21369634 27 7.5
04_03_0924 + 20852048-20854474 27 7.5
04_03_0189 + 12444797-12444976,12445057-12445204,12445574-124458... 27 7.5
03_02_0592 - 9687700-9687933,9688515-9688591,9688891-9688999,968... 27 7.5
01_05_0305 + 20659199-20660026,20660147-20660179 27 7.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 26 9.9
05_05_0173 + 22956927-22958615 26 9.9
03_01_0181 + 1464082-1464626,1465327-1465480 26 9.9
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 26 9.9
>02_04_0088 + 19633641-19634228
Length = 195
Score = 33.5 bits (73), Expect = 0.065
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = -2
Query: 311 IQRRDGGTRLLRSPVSPAAVELLDPGGDGGCVVLTEQAAALLVHARSREQPATAISVASS 132
++++ GG R +P + D GG GG Q AALL +PA + SVA+
Sbjct: 55 VEKKKGG----RGAAAPDEAAMADGGGGGGGAGDHHQQAALLAPLPVSRRPAPS-SVAAG 109
Query: 131 PERRWSARQTLHR 93
ER SAR+ L R
Sbjct: 110 EERE-SARERLKR 121
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 293 GTRLLRSPVSPAAVELLDPGGDGGCVVLTEQAAALL 186
G+ ++ +PV A+ L+ GGD CV L A+L
Sbjct: 756 GSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAIL 791
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 295 EGRAFFGALYPPQLSNSSIPVETVAASYLQNKLQRXWSM 179
E +FF PPQ+ + ++ A LQN+++R + +
Sbjct: 322 ECESFFNFFSPPQVPDDDAKIDENTAEELQNQMERDYDI 360
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = -3
Query: 304 GETEGRAFFGALYPPQLSNSSIPV-ETVAASYLQNKLQRXWSMLGVGNSPRPQFP*RAAQ 128
G+++G PP ++ P E +SYL K + G G P P A
Sbjct: 3 GDSDGSKDANPGAPPSTTDPPFPNRELTLSSYLCEKPTLASAAAGGGGGAGPSSPPNPAA 62
Query: 127 SGGGVRGKRCTD 92
+ G GK C +
Sbjct: 63 AAAGDDGKHCVE 74
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 255 SCGGYRAPKKARPSVSPLYTTTKIRQQAARSSEG 356
+ GG AP KA P P T T QAA SS+G
Sbjct: 1169 NAGGGAAPNKAAPKRRPRKTAT--NTQAAESSDG 1200
>08_01_0965 + 9739150-9739557
Length = 135
Score = 27.5 bits (58), Expect = 4.3
Identities = 24/74 (32%), Positives = 28/74 (37%)
Frame = -2
Query: 314 GIQRRDGGTRLLRSPVSPAAVELLDPGGDGGCVVLTEQAAALLVHARSREQPATAISVAS 135
G +R D R + + A PGG+ L A ALL R A S A
Sbjct: 8 GARRGDQRPREVAADSGGAPAATAAPGGEAR---LRLPALALLGLRRQGAAAAGRGSAAG 64
Query: 134 SPERRWSARQTLHR 93
ERRW R L R
Sbjct: 65 GQERRWRPRAVLQR 78
>07_03_1596 - 28012392-28012799
Length = 135
Score = 27.5 bits (58), Expect = 4.3
Identities = 24/74 (32%), Positives = 28/74 (37%)
Frame = -2
Query: 314 GIQRRDGGTRLLRSPVSPAAVELLDPGGDGGCVVLTEQAAALLVHARSREQPATAISVAS 135
G +R D R + + A PGG+ L A ALL R A S A
Sbjct: 8 GARRGDQRPREVAADSGGAPAATAAPGGEAR---LRLPALALLGLRRQGAAAAGRGSAAG 64
Query: 134 SPERRWSARQTLHR 93
ERRW R L R
Sbjct: 65 GQERRWRPRAVLQR 78
>06_01_0904 -
6964715-6965245,6965432-6965488,6965680-6965721,
6965839-6965944,6966019-6966204,6966479-6966618
Length = 353
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 108 PRTPPPLWAARYGNCGRGLFPTPSM 182
P PP L+ YG G P PSM
Sbjct: 231 PPVPPELYVDPYGGAAAGAVPPPSM 255
>05_01_0434 -
3438978-3439237,3439638-3439908,3440078-3440232,
3440367-3440552,3444429-3444518,3446514-3447012
Length = 486
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 80 TRHXVGAA-FAAHSTAALGCSLRKLRSRAVPD---SEHG 184
T H GA F H T ALGC +KL +R D EHG
Sbjct: 311 TLHKNGAKKFWIHGTGALGCLPQKLATRGEIDRDLDEHG 349
>02_01_0051 - 385738-385968,386439-386864
Length = 218
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 182 HARSREQPATAISVASSPER 123
H R+R+QPA A + A PE+
Sbjct: 76 HRRARQQPAAAAAAAEDPEK 95
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 295 EGRAFFGALYPPQLSNSSIPVETVAASYLQNKLQRXWSM 179
E +FF PPQ+ ++ A LQN+++R + +
Sbjct: 217 EYESFFNFFSPPQVPEDDAKIDENTAEELQNQMERDYDI 255
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 27.1 bits (57), Expect = 5.6
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -2
Query: 284 LLRSPVSPAAVELLDPGGDGGCVVLTEQAAALLVHARSREQPATAISVASSPERRWSARQ 105
LL P++ AVE++ G+ + +A +HA SR Q + PER +
Sbjct: 659 LLLQPLAAKAVEVVPKRGERIAAKMALEALEGPIHAVSRAQRNLMRKLGLVPERGPVTAE 718
Query: 104 TLHRXNDALIXVPVR*ERMMMQTAMF 27
+ N AL P+ E ++ +++F
Sbjct: 719 AVAAYN-ALFSKPLSQEHIIALSSLF 743
>12_02_1233 + 27224219-27225607
Length = 462
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/72 (27%), Positives = 27/72 (37%)
Frame = +1
Query: 49 ILSHLTGTXINASXCRCSVCRALHRRSGLLATEIAVAGCSRLRAWXXXXXXXXXXXXQPP 228
+L HL + AS C C R + LLAT A+ C+ + P
Sbjct: 8 VLRHLPRRSLAASRCVCQSWRVIIDDRSLLAT-AALLPCTLRGIFVQIGVPTLSGFFARP 66
Query: 229 SPPGSRSSTAAG 264
SP G+R G
Sbjct: 67 SPAGTRRPPIPG 78
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 26.6 bits (56), Expect = 7.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -2
Query: 365 VAPALAAPRCLLSDLRCGIQRRDGGTRLLRSPVSPAAVELLD-PGGDGGCVVLTEQAAAL 189
+APA AP G R G+ V PA+ D GGDGG VV +AA +
Sbjct: 205 LAPAAPAPSPAFRGFFSG--RHSTGSVRAPGRVGPASRRSADLVGGDGGAVVGCFEAAKV 262
Query: 188 LVHARSREQPATAIS 144
+PA A++
Sbjct: 263 RKDRVLLMEPAAAVA 277
>04_03_0974 + 21367304-21369634
Length = 776
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 331 SRQRGAARAGATWRPALC 384
+R +GA AGA++RP++C
Sbjct: 163 ARWKGACEAGASFRPSMC 180
>04_03_0924 + 20852048-20854474
Length = 808
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 251 ELLDPGGDGGCVVLTEQAAALLVHARSREQPATAISVA 138
+LLD DG VVL + AA + R++ T I VA
Sbjct: 416 QLLDAASDGNGVVLYVRLAAKELQISERKKSGTLIGVA 453
>04_03_0189 +
12444797-12444976,12445057-12445204,12445574-12445874,
12445930-12446144,12446145-12446282,12446414-12446605,
12446740-12446786
Length = 406
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 138 RYGNCGRGLFPTPSMDQXRCSLFCKYDAATVSTGIEEFDSC 260
R G+ GR P++ + RC+ YD V G E F SC
Sbjct: 60 RDGSLGRRGGAVPAVSEKRCNFLEHYD-LRVFFGREHFQSC 99
>03_02_0592 -
9687700-9687933,9688515-9688591,9688891-9688999,
9689162-9689260,9689368-9689454,9689570-9689630,
9689739-9689813,9689936-9689961
Length = 255
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 286 AFFGALYPPQLSNSSIPVETVAASYLQNKLQRXWSMLGVG 167
AF ALY P +S + + ETVAA +K++ S G G
Sbjct: 133 AFTKALYSPLISKADLSAETVAA---LDKIEAALSKFGDG 169
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 216 DAATVSTGIEEFDSCGGYRAP-KKARPSVSPLYTTTKIRQQAARSSEGRGDMATGALLH 389
+ A VS G E + GG R KAR V PL +++ AA ++ ++ +LH
Sbjct: 91 ERAPVSHGGEAAPASGGDRGDGDKARHVVVPLKLPPRLQAAAAAAAAADSSLSPNTVLH 149
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 78 QRVIXSVQRLPRTPPPLWAARYGNCGRGLFPTPSM 182
+R + +V LP PPP+ G F PSM
Sbjct: 48 ERPVAAVPPLPTGPPPVTTTPMPTSASGAFSQPSM 82
>05_05_0173 + 22956927-22958615
Length = 562
Score = 26.2 bits (55), Expect = 9.9
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = -2
Query: 332 LSDLRCGIQRRDGGTRLLRSPVSPAAVELLDPGGDGGCVVLTEQAAALLVHARSREQPAT 153
+SDLR ++ G +P +P ELL G+ V L A+ ++ A
Sbjct: 458 VSDLRRMVRPSPYGASTSSNPPNPPNTELLPVDGNHVAVALAADQASNSSTMAVIQEDAA 517
Query: 152 AISVASSPERRWSARQTLHR-XNDAL 78
P S+R R NDAL
Sbjct: 518 FTESTGEPSNAGSSRSLRRRGRNDAL 543
>03_01_0181 + 1464082-1464626,1465327-1465480
Length = 232
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 206 EQAAALLVHARSREQPATAISVASSPERRWSARQ 105
E A R EQ A + A PERR SAR+
Sbjct: 90 EPGPARTASGRQSEQQQQAAAAAGRPERRGSARR 123
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 26.2 bits (55), Expect = 9.9
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 132 AARYGNC---GRGLFPTPSMDQXRCSLFCKYDAATVSTGIEEFDSCGGYRAPKK 284
A + G C GR P D SL C +AAT + E+ CG ++ P++
Sbjct: 326 AGKCGGCPLQGRRTCPCGKKDYP--SLDCDAEAATCGSTCEKVLGCGRHKCPER 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,366,408
Number of Sequences: 37544
Number of extensions: 250231
Number of successful extensions: 1189
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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