Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M01
         (354 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000069ECAB Cluster: UPI000069ECAB related cluster; n...    33   1.1  
UniRef50_A0DKK6 Cluster: Chromosome undetermined scaffold_54, wh...    33   1.4  
UniRef50_A6EG24 Cluster: Putative outer membrane protein; n=1; P...    31   4.3  
UniRef50_A0D854 Cluster: Chromosome undetermined scaffold_40, wh...    31   4.3  
UniRef50_A6SBQ2 Cluster: Predicted protein; n=1; Botryotinia fuc...    31   4.3  
UniRef50_O84625 Cluster: Putative uncharacterized protein; n=3; ...    31   7.5  
UniRef50_A0Y7R5 Cluster: Putative enoyl-CoA hydratase paaG; n=1;...    31   7.5  
UniRef50_Q6IGF6 Cluster: HDC06432; n=1; Drosophila melanogaster|...    30   9.9  
UniRef50_Q6AXL3 Cluster: Leucine-rich repeat-containing protein ...    30   9.9  

>UniRef50_UPI000069ECAB Cluster: UPI000069ECAB related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069ECAB UniRef100 entry -
           Xenopus tropicalis
          Length = 320

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/77 (23%), Positives = 27/77 (35%)
 Frame = +1

Query: 46  CSYKQSQGNRYPQRNTRSAPGTRVPTSSGELTCQTLXXXXXXHYKRQLIKFPHMRYGRSK 225
           CSY+  Q  ++   +T S P   +PT +   TC         H        P+M      
Sbjct: 147 CSYRHLQSPKHAHTDTCSPPNVLIPTPAVPQTCSYRHLQSPKHAHTDTCSPPNMHIPTPA 206

Query: 226 IKLCICYQHLNDCLSTH 276
           +     Y+HL      H
Sbjct: 207 VPQTCTYRHLQSPKRAH 223



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 17/77 (22%), Positives = 27/77 (35%)
 Frame = +1

Query: 46  CSYKQSQGNRYPQRNTRSAPGTRVPTSSGELTCQTLXXXXXXHYKRQLIKFPHMRYGRSK 225
           C+Y+  Q  ++   +T S P   +PT +   TC         H        P+M      
Sbjct: 19  CTYRHLQSPKHAHTDTCSPPNVHIPTPAVPQTCTYRHLQSPKHAHTDTCSPPNMHIPTPA 78

Query: 226 IKLCICYQHLNDCLSTH 276
           +     Y+HL      H
Sbjct: 79  VPQTCTYRHLQSPKRAH 95


>UniRef50_A0DKK6 Cluster: Chromosome undetermined scaffold_54, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_54, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2131

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +1

Query: 19   CRXYTNTLECSYKQSQGNRYPQRNTRSAPGTRVPTSS--GELTCQTLXXXXXXHYKRQLI 192
            C  Y    +C  + ++G +Y + N  ++ G  V  S    + +CQ L         +QLI
Sbjct: 1820 CSSYKLAGQCK-QNNKGIQYTEDNNINSTGICVWESGLCRDQSCQDLKANNHDECSKQLI 1878

Query: 193  KFPHMRYGRSKIKLCICYQHLNDCLS 270
               +   G   I  C  YQ  N CLS
Sbjct: 1879 SCTYNSIGCISIAKCSQYQDQNTCLS 1904


>UniRef50_A6EG24 Cluster: Putative outer membrane protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative outer membrane
           protein - Pedobacter sp. BAL39
          Length = 544

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 117 SNQQR*VNLSDVGNNGYCTLQTSIN*IPTHEVRQVE 224
           +N    +++S VGNNGY  + T+ N  P +++R+ E
Sbjct: 308 TNMSEALDVSYVGNNGYVVIPTAFNAYPENDLRKKE 343


>UniRef50_A0D854 Cluster: Chromosome undetermined scaffold_40, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_40,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1973

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 307 NKKIVNVVTSCELTNNRLDVDSKCTVLFSTC 215
           +KK+ ++ TSC+L  N L+ D  C    S+C
Sbjct: 164 DKKVCSLTTSCDLLPNTLNSDGLCRAQISSC 194


>UniRef50_A6SBQ2 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 136

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 22  RXYTNTLECSYKQSQGNRYPQRNTRSAPGTRVPT 123
           R    ++E S KQ   N+   + T+SAPG+R P+
Sbjct: 13  RSIKESIERSRKQKNKNKQANKQTKSAPGSRTPS 46


>UniRef50_O84625 Cluster: Putative uncharacterized protein; n=3;
           Chlamydia|Rep: Putative uncharacterized protein -
           Chlamydia trachomatis
          Length = 838

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +3

Query: 219 VENKTVHLLSTSKRLFVNSQLVTTFTIFLFAPLG-DERSVQVTNS 350
           V N+T+++ + +  LF N   +  F +  FAP+G +E +++VTN+
Sbjct: 313 VLNETIYINARNSSLFSNICSLVEFIMGSFAPIGLNETTIEVTNA 357


>UniRef50_A0Y7R5 Cluster: Putative enoyl-CoA hydratase paaG; n=1;
           marine gamma proteobacterium HTCC2143|Rep: Putative
           enoyl-CoA hydratase paaG - marine gamma proteobacterium
           HTCC2143
          Length = 271

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -3

Query: 352 NEFVTCTDRSSPRGANKKIVNVVTSCELTNNRLDVDSKCTVLFSTCRTSCVGI*LIDV 179
           N  V   +R     A   ++    S ++T    D D++C +L  T +  C G+ L+DV
Sbjct: 18  NVVVITLNRPDRLNAISHVLLTELSAKMTEANKDPDTRCVILTGTGKGFCSGLDLVDV 75


>UniRef50_Q6IGF6 Cluster: HDC06432; n=1; Drosophila
           melanogaster|Rep: HDC06432 - Drosophila melanogaster
           (Fruit fly)
          Length = 250

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 120 WNARTGRTTCIALWITIPLRL 58
           W+     TTCI++W T+P RL
Sbjct: 185 WHRGAAATTCISIWTTVPNRL 205


>UniRef50_Q6AXL3 Cluster: Leucine-rich repeat-containing protein 33
           precursor; n=1; Danio rerio|Rep: Leucine-rich
           repeat-containing protein 33 precursor - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 685

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = -3

Query: 343 VTCTDRSSPRGANKKIVNVVTSCELTNNRLDVDSKCTVLFSTCRTSCVGI*LIDVCNVQ* 164
           +TC D +  R  +K ++     C  TNN  +      +LF T   S +GI +I +   + 
Sbjct: 611 ITCLDLNYRR--HKVVLTDAVYCGFTNNNKESVVWYILLFVTVSVSIMGISVIYMLTFKP 668

Query: 163 PLLPTSDKLTHRCWLERAY 107
            +LP   K   +CW   +Y
Sbjct: 669 RMLPRVIK--KKCWRPTSY 685


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,014,207
Number of Sequences: 1657284
Number of extensions: 6175464
Number of successful extensions: 14194
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14190
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)