Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M01
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.40 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   4.9  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    20   8.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 28  YTNTLECSYKQSQGNRYPQRNTRSAPGTRVPTSS 129
           YT+     ++ S+ +  P+ + +SAPG R P  S
Sbjct: 223 YTSICIEIWQSSESSLRPRSSQKSAPGKRTPLIS 256



 Score = 20.6 bits (41), Expect = 4.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 120 WNARTGRTTCIALWITIPLRLFI*TFQSICI 28
           W  R   T        +PL + I T+ SICI
Sbjct: 198 WGKRAYVTWYSISVFMVPLVVLIFTYTSICI 228


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 346 FVTCTDRSSPRGANKKIVNVVT 281
           F+     S+ RG NKK+  V T
Sbjct: 82  FIAAAFESNSRGGNKKLSKVET 103


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298  IVNVVTSCELTNNRLD 251
            ++N+  S E+ N RLD
Sbjct: 1134 LINIADSLEMLNKRLD 1149


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298  IVNVVTSCELTNNRLD 251
            ++N+  S E+ N RLD
Sbjct: 1134 LINIADSLEMLNKRLD 1149


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298  IVNVVTSCELTNNRLD 251
            ++N+  S E+ N RLD
Sbjct: 1134 LINIADSLEMLNKRLD 1149


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298  IVNVVTSCELTNNRLD 251
            ++N+  S E+ N RLD
Sbjct: 1134 LINIADSLEMLNKRLD 1149


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 237 AQFYFRPAVPH-VWEFN*LT 181
           A+FY  P VPH  +  N LT
Sbjct: 88  ARFYSTPIVPHFAYNHNPLT 107


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 239 FAINI*TIVCQLTTCYNIYYF 301
           F IN+  +   LT CY +YY+
Sbjct: 105 FVINVLYV---LTLCYAVYYW 122


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 346 FVTCTDRSSPRGANKKI 296
           F+     S+ RG NKK+
Sbjct: 22  FIAAAFESNSRGGNKKL 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,076
Number of Sequences: 336
Number of extensions: 1699
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)