Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M01
         (354 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1240 + 25095472-25095942,25096021-25096314,25096563-250973...    27   3.2  
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424...    27   5.6  
10_07_0133 + 13274190-13274317,13274533-13276371,13277064-132772...    26   7.4  
02_01_0714 + 5339408-5340020,5340117-5340319,5340408-5340605,534...    26   9.8  

>07_03_1240 +
           25095472-25095942,25096021-25096314,25096563-25097383,
           25097466-25097636,25097716-25098016
          Length = 685

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 97  YVYCAVDNDSPEIVYMNIPKYLYXTY-NANNFE 2
           Y+ CA + +   I+ + IPK+   TY N+NNF+
Sbjct: 578 YIMCAHNQERHWILLVIIPKWSRVTYLNSNNFK 610


>04_04_1574 -
           34536744-34537136,34541247-34541405,34541497-34542411,
           34543642-34543731,34544324-34544390,34544483-34544676,
           34544770-34545510,34545596-34545661,34545783-34545908,
           34545978-34546073,34546153-34546521,34546602-34546724,
           34546802-34546906,34547394-34547531,34547665-34547760,
           34548018-34548275
          Length = 1311

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 322 SPRGANKKIVNVVTSCELTNNRLDVDSKCTV 230
           +P  A ++   +   CEL    LDV+S C V
Sbjct: 262 TPENAERRQGAIAALCELLRQGLDVESSCRV 292


>10_07_0133 +
           13274190-13274317,13274533-13276371,13277064-13277253,
           13277442-13277657
          Length = 790

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 210 PHVWEFN*LTFVMCSSRCCQRLTS*LTAAGWNARTGRTTCI 88
           PH   F  L F   S +CC  +T+ L+   W+ +  R++ I
Sbjct: 442 PHEASFRILPFQTSSRKCCNYVTA-LSIIAWDEKRTRSSRI 481


>02_01_0714 +
           5339408-5340020,5340117-5340319,5340408-5340605,
           5340703-5340774,5341197-5341292,5341828-5341907,
           5341993-5342068,5342152-5342362,5342562-5342755,
           5342834-5342939,5343037-5343126,5343470-5344206
          Length = 891

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 135 LTAAGWNARTGRTTCIALWIT 73
           L+   WNA  G T+ I+ WI+
Sbjct: 668 LSTGDWNAEAGNTSAISDWIS 688


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,993,987
Number of Sequences: 37544
Number of extensions: 164199
Number of successful extensions: 397
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)