Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_M01
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   1.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   1.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   1.9  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   1.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   5.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   5.9  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    22   5.9  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = +1

Query: 61  SQGNRYPQRNTRSAPGTRV---PTSSGE 135
           SQ +R PQ ++ SA  + V   PT+SGE
Sbjct: 41  SQSSRRPQHSSTSASSSSVPTLPTTSGE 68


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = +1

Query: 61  SQGNRYPQRNTRSAPGTRV---PTSSGE 135
           SQ +R PQ ++ SA  + V   PT+SGE
Sbjct: 41  SQSSRRPQHSSTSASSSSVPTLPTTSGE 68


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 44  NVHINNLRGIVIHSAIHVVRPVRAFQP 124
           N H+N     +I + +H++ P R  +P
Sbjct: 378 NTHMNATNHALIQTLVHLMHPTRVPKP 404


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 55  YMNIPKYLYXTYNANNF 5
           Y+ +P Y Y  Y AN+F
Sbjct: 51  YLQVPGYRYAEYAANSF 67


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 256 LDVDSKCTVLFSTCRTSCV 200
           LD+  +C V   TC   CV
Sbjct: 348 LDIGLRCVVCDFTCHQQCV 366


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 234 QFYFRPAVPHVWEFN 190
           Q Y  P +P  W+FN
Sbjct: 169 QLYDSPTLPESWKFN 183


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 234 QFYFRPAVPHVWEFN 190
           Q Y  P +P  W+FN
Sbjct: 169 QLYDSPTLPESWKFN 183


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 249 LIANAQFYFRPAVPHVWEFN*LTFVMCSSRCCQRLT 142
           +I  +QF FRP++    + + +T  +  +RC ++ T
Sbjct: 32  IIPKSQFGFRPSLSTTHQLHRVTNNIVHNRCNRKST 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,493
Number of Sequences: 2352
Number of extensions: 7312
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)