Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L24
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...   100   1e-21
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...   100   1e-21
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    35   0.058
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    31   0.94 
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    29   3.8  
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   6.7  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/84 (48%), Positives = 61/84 (72%)
 Frame = -2

Query: 760 EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADD 581
           EAE++  ++     IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++
Sbjct: 181 EAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANN 240

Query: 580 DHRVTLAEWGKCLELDELEMEERC 509
           D  +++ EWGKCL L E E++ERC
Sbjct: 241 DGNISIKEWGKCLGLKEGEIQERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/84 (48%), Positives = 61/84 (72%)
 Frame = -2

Query: 760 EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADD 581
           EAE++  ++     IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++
Sbjct: 181 EAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANN 240

Query: 580 DHRVTLAEWGKCLELDELEMEERC 509
           D  +++ EWGKCL L E E++ERC
Sbjct: 241 DGNISIKEWGKCLGLKEGEIQERC 264


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -2

Query: 748 NLTRRWANAAI-WKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADD 581
           N T+   ++AI WK+  L+   N+  + R E  P ++ L+    +  C       CD + 
Sbjct: 164 NATKVSRDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNK 222

Query: 580 DHRVTLAEWGKCL 542
           D ++T  EW KC+
Sbjct: 223 DRKLTFDEWRKCI 235


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = -2

Query: 715 WKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRC-DADDDHRVTLAEWGKCLE 539
           W +   D   + + +S+ EL PI       E C+  F+D C D   D  +++ EW  C  
Sbjct: 83  WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139

Query: 538 L-DELEMEERCDDFNENAEHYL 476
             D+L  E  C     + + +L
Sbjct: 140 FSDDLRHEPPCHKAKHDVDPHL 161


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -2

Query: 625 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 476
           E C+  F+D C D   D  +++ EW  C    D+L  E  C     + + +L
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 169


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 541 ELDELEMEERCDDFNENAE 485
           E+++LE E RC   NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,896,349
Number of Sequences: 27780
Number of extensions: 299069
Number of successful extensions: 625
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)