Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L22
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    49   5e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.31 
UniRef50_Q0FY98 Cluster: Malic enzyme; n=1; Fulvimarina pelagi H...    35   0.94 
UniRef50_Q4UE53 Cluster: ABC1-related protein, putative; n=2; Th...    32   5.0  
UniRef50_Q53D50 Cluster: JM20; n=3; Cercopithecine herpesvirus 1...    32   6.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 48.8 bits (111), Expect = 5e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +2

Query: 170 YLLLRWSDELTAHLILSGYWSP 235
           +LLLRW DELTAHL+LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 33.5 bits (73), Expect = 2.2
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 232 PIDIYNVNAPPTSRYKF 282
           P  +Y+VNAPPTSRYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.3 bits (80), Expect = 0.31
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +1

Query: 358 AGWWYLPVRTPKRSYHQ 408
           A WWYLP RT KRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q0FY98 Cluster: Malic enzyme; n=1; Fulvimarina pelagi
           HTCC2506|Rep: Malic enzyme - Fulvimarina pelagi HTCC2506
          Length = 144

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 327 RFEDLGSCCNYTETLELISRGGWRIYVVDVYGL 229
           RF+  G CC+  +T  L+ +GG ++ VVD  G+
Sbjct: 58  RFDLAGLCCSLIDTFRLVRKGGCKVSVVDAGGM 90


>UniRef50_Q4UE53 Cluster: ABC1-related protein, putative; n=2;
            Theileria|Rep: ABC1-related protein, putative - Theileria
            annulata
          Length = 1265

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 6    YRYYTVTVVTDDENNI-MTINYLRL*LTEYKRKYSIPCIYIIICRGVKGGLSNILFIYC 179
            YR   V +V+ D+N +   +  L + + EY+R  S     I I R  KG + +  + YC
Sbjct: 870  YRNRNVKLVSLDDNRLDSNLKTLNISIDEYRRNLSFESTVIDIPRDEKGEIDSTYYCYC 928


>UniRef50_Q53D50 Cluster: JM20; n=3; Cercopithecine herpesvirus
           17|Rep: JM20 - Macaca fuscata rhadinovirus
          Length = 409

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 374 RYHHPAYFRREAVMRFGSKIWVAVVTILRP*NLYL 270
           R H P   R   V R+G KI+VA+VT++RP  ++L
Sbjct: 116 RVHAP---RTTRVSRYGLKIFVAIVTVVRPPGVFL 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,674,608
Number of Sequences: 1657284
Number of extensions: 8698520
Number of successful extensions: 16073
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16071
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)