Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L22
         (449 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0684 + 6009474-6009582,6009715-6009904,6011412-6011483,601...    28   3.0  
09_04_0596 + 18857082-18857484,18857572-18857728,18857801-18858221     27   7.0  

>08_01_0684 +
           6009474-6009582,6009715-6009904,6011412-6011483,
           6011644-6011715,6011806-6011877,6012163-6012234,
           6012283-6012354,6012479-6012550,6012634-6012705,
           6013112-6013183,6013275-6013349,6013453-6013524,
           6013619-6013684,6013752-6013777,6014179-6014558,
           6014642-6014840,6014910-6015068,6015569-6015613,
           6015742-6015973,6016053-6016203,6016306-6016665
          Length = 879

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 418 FSFTGGRTSWESARVGTTTPPISAVKQ 338
           + F GG TS+ ++  G+TTP +S  K+
Sbjct: 833 WQFRGGNTSYVTSHSGSTTPKLSRQKE 859


>09_04_0596 + 18857082-18857484,18857572-18857728,18857801-18858221
          Length = 326

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 389 GVRTGRYHHPAYFRREAVMRFGSKIW 312
           G+     HHP Y  + A M F + +W
Sbjct: 197 GIHEDLLHHPEYLEQNATMAFMAAMW 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,224,462
Number of Sequences: 37544
Number of extensions: 239202
Number of successful extensions: 420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)