Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L18
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   257   2e-70
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.80 
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           26   1.4  
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        25   3.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  257 bits (630), Expect = 2e-70
 Identities = 120/165 (72%), Positives = 142/165 (86%)
 Frame = -3

Query: 562 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 383
           LADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DV
Sbjct: 71  LADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDV 130

Query: 382 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 203
           KTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM  II R++T+++L+ VV K
Sbjct: 131 KTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEK 190

Query: 202 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEXSKLMELH 68
           L+PDSIAKDIEKAC  +YPL DV IRKVKVLK+PRF+ S LMELH
Sbjct: 191 LLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELH 235



 Score =  107 bits (258), Expect = 3e-25
 Identities = 49/58 (84%), Positives = 52/58 (89%)
 Frame = -2

Query: 737 GXKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 564
           G KG KKK+VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVS
Sbjct: 13  GKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVS 70


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 152 LPSARCLHPKGESVEEAPFRXLEVDGTS 69
           +P   C H  G ++E+A    LE DGT+
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGTA 584


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 562 LADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 407
           LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 183 LAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 562 LADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 407
           LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 108 LAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 122 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 208
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +1

Query: 97  NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 213
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,842
Number of Sequences: 2352
Number of extensions: 18080
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)