Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_L18
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 256 2e-68
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 256 2e-68
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 256 2e-68
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 245 6e-65
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 196 3e-50
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 182 5e-46
AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p pro... 29 6.6
AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA... 29 6.6
AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB... 29 6.6
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 29 8.7
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 256 bits (627), Expect = 2e-68
Identities = 122/165 (73%), Positives = 139/165 (84%)
Frame = -3
Query: 562 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 383
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 382 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 203
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 202 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEXSKLMELH 68
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF+ SKL+ELH
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Score = 100 bits (239), Expect = 2e-21
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = -2
Query: 737 GXKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 564
G KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 13 GKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 256 bits (627), Expect = 2e-68
Identities = 122/165 (73%), Positives = 139/165 (84%)
Frame = -3
Query: 562 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 383
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 21 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 80
Query: 382 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 203
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 81 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 140
Query: 202 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEXSKLMELH 68
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF+ SKL+ELH
Sbjct: 141 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 185
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 256 bits (627), Expect = 2e-68
Identities = 122/165 (73%), Positives = 139/165 (84%)
Frame = -3
Query: 562 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 383
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 382 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 203
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 202 LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEXSKLMELH 68
L DSIAKDIEK+C IYPL DV IRKVKVLK+PRF+ SKL+ELH
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Score = 100 bits (239), Expect = 2e-21
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = -2
Query: 737 GXKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 564
G KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 13 GKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 245 bits (599), Expect = 6e-65
Identities = 118/164 (71%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = -3
Query: 556 DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKT 377
DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT
Sbjct: 74 DLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKT 133
Query: 376 TDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSELREVVNKL 200
DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 134 VDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKL 193
Query: 199 IPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEXSKLMELH 68
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF+ SKL+ELH
Sbjct: 194 ALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 237
Score = 98.7 bits (235), Expect = 7e-21
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = -2
Query: 737 GXKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 564
G KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVS
Sbjct: 13 GKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVS 70
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 196 bits (478), Expect = 3e-50
Identities = 92/130 (70%), Positives = 109/130 (83%)
Frame = -3
Query: 457 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 278
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 277 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 98
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 97 FEXSKLMELH 68
F+ SKL+ELH
Sbjct: 121 FDVSKLLELH 130
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 182 bits (443), Expect = 5e-46
Identities = 85/118 (72%), Positives = 99/118 (83%)
Frame = -3
Query: 562 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 383
LADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++
Sbjct: 71 LADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
Query: 382 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVV 209
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
Score = 100 bits (239), Expect = 2e-21
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = -2
Query: 737 GXKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 564
G KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVS
Sbjct: 13 GKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVS 70
>AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p
protein.
Length = 790
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -1
Query: 618 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 439
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 205 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 262
Query: 438 SSG 430
G
Sbjct: 263 LEG 265
>AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA,
isoform A protein.
Length = 790
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -1
Query: 618 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 439
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 205 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 262
Query: 438 SSG 430
G
Sbjct: 263 LEG 265
>AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB,
isoform B protein.
Length = 1091
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -1
Query: 618 PGNENCFGRIEGKSFRSFPWLIYKLTLTRKGLSANSD*SPNMCKDVMCSATSTAWTSQPI 439
P + GR+ G+ F + + L + + A++ +C+D+ C WTS P
Sbjct: 506 PWDHTAGGRLPGERFNANQQCM--LRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPA 563
Query: 438 SSG 430
G
Sbjct: 564 LEG 566
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 125 SDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 277
+ AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 264 TSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,175,008
Number of Sequences: 53049
Number of extensions: 757072
Number of successful extensions: 2368
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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