Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L10
         (340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   1.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.3  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    21   9.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    21   9.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    21   9.6  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    21   9.6  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 289 RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCT 179
           +VLIALS++L   + K      +V + G +G  G  T
Sbjct: 2   KVLIALSTVLCVVLAKDQPRKAIVYLQGTSGVSGNVT 38


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 60   CDRLLQHYCIRLRHXHGPET 1
            C RL+QH   R +  HG  T
Sbjct: 1994 CARLIQHAWKRYKQRHGGGT 2013


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2

Query: 330 RPADAFRNTPALVHVCLLH*ARYYKPKWINPTFLLVS*KCLAV 202
           R + A   TP L  V +    R        PTFLLV  K LA+
Sbjct: 118 RSSRAQARTPVLYQVMVYDIVRPGVKGKRAPTFLLVDTKTLAI 160


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 120 PFTFLMI*RLVSPMNSTFT*VH 185
           PF FLM+ R   P+ +  T +H
Sbjct: 504 PFNFLMVRRGTVPLPARITALH 525


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 163 TRPSLEYTGPENQYGQALSRHEQE 234
           +R  LE     ++Y Q +  HE+E
Sbjct: 673 SRSRLEMQKKRSEYSQLIQEHEKE 696


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 195 EPVRPSTFTTRARTLGLSILACNIELNAISTRAPKLACFEKHRPAE 332
           EPVR     T + T  LSI A  I L+     +P+    +K  P E
Sbjct: 28  EPVRVPPLATASLTASLSIPAECIVLSVADEPSPERK-VQKLEPTE 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,036
Number of Sequences: 2352
Number of extensions: 6020
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)