Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L06
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    29   3.3  
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical p...    28   7.7  
Z14148-1|CAA78520.1|  854|Caenorhabditis elegans hypothetical po...    28   7.7  
Z14146-1|CAA78516.1|  854|Caenorhabditis elegans unc-33 protein.       28   7.7  
AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm rece...    28   7.7  
AF000264-12|AAK70648.2|  467|Caenorhabditis elegans Hypothetical...    28   7.7  
AC006737-1|AAM97965.1|  854|Caenorhabditis elegans Uncoordinated...    28   7.7  

>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
 Frame = -2

Query: 698 TDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE--NELESFKIE---CDEAENMTCIA 534
           T+  +N +    +   +TT    P +D   QW  +   EL   KIE   CD A    C+ 
Sbjct: 159 TNRMQNVQKHPETSLRRTT--RTPVADQIHQWKTQLSGELTKSKIEQKTCDAALYQVCLK 216

Query: 533 HETFSQKTILVKKN 492
           H + SQ   + +KN
Sbjct: 217 HVSCSQLWSMFRKN 230


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 1   IGILICYKPSHLGSYCT---I*LKHNLMFSTE-IFKSFSIKLTLKYISVIGS 144
           I I+ CY  SH+ S C    I L HN+++ST  ++ S  +  T+   S + +
Sbjct: 271 IAIVTCYIVSHIPSACLYVYINLFHNVLYSTRWMYTSVQVSTTVVTCSKVAN 322


>Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.16 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 13  ICYKPSHLGSYCTI*LKHNLMFSTEIFKS-FSIKLTLKYISVIGSLPTMSVFIMISTYSH 189
           +CY+P  L  YC I       F+  I KS F + L  K+++V      +S++++ ++ + 
Sbjct: 36  VCYRPELLLIYCKIAADICYSFTVSIMKSYFLVILCYKHLAV----KNLSIYMLETSVTM 91

Query: 190 GSVVEFFS 213
           G +   F+
Sbjct: 92  GIIKGTFA 99


>Z14148-1|CAA78520.1|  854|Caenorhabditis elegans hypothetical
           polypeptide I protein.
          Length = 854

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 698 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 567
           T  + ++R + A  PS    SN   S P P+W  G  +++   IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182


>Z14146-1|CAA78516.1|  854|Caenorhabditis elegans unc-33 protein.
          Length = 854

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 698 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 567
           T  + ++R + A  PS    SN   S P P+W  G  +++   IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182


>AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm
           receptor protein 148 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 403 MIW-VERNPYMFFKEWSANVLHQKDCFCIVKFFFTKIVFCENVS*AMHVIFSASSH 567
           M W V  N    +K W   ++   +C CI+   F+ I+FC   S     + SAS H
Sbjct: 180 MYWSVGTNGEKIWKFWE--IMSSVECVCIIAVCFSTILFC--ASNIYFTMKSASGH 231


>AF000264-12|AAK70648.2|  467|Caenorhabditis elegans Hypothetical
           protein F43E2.1 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 350 LDIKASSPEIIQSIVQLLTWNDVAIGFYPTSKSLFHYG 237
           L I  +S  II  ++ +L W D+    + T   LFH G
Sbjct: 213 LRIYPNSYSIILLLIHVLQWYDILPNLHQTHSDLFHRG 250


>AC006737-1|AAM97965.1|  854|Caenorhabditis elegans Uncoordinated
           protein 33 protein.
          Length = 854

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 698 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 567
           T  + ++R + A  PS    SN   S P P+W  G  +++   IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,871
Number of Sequences: 27780
Number of extensions: 368721
Number of successful extensions: 1102
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)