Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L04
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   303   3e-84
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   0.96 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    26   0.96 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.7  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   8.9  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  303 bits (744), Expect = 3e-84
 Identities = 144/188 (76%), Positives = 164/188 (87%)
 Frame = -1

Query: 576 TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 397
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 396 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 217
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VY
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVY 124

Query: 216 DAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQXGYKKLTGREVT 37
           DAILEDLVFPAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF   YKKLTGR+VT
Sbjct: 125 DAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVT 184

Query: 36  FEFPEPYL 13
           FEFPE YL
Sbjct: 185 FEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -1

Query: 231 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQXGYK 61
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -1

Query: 231 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQXGYK 61
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 149 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 301
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -1

Query: 231 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQXGYK 61
           L S Y+ ++  +V   + +   +++KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 31  LLSNYNKLVRPVVNVTDAL--TVKIKLKLSQLIDVNL-KNQIMTTNLWVEQTWYDYK 84


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 334 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 420
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,563
Number of Sequences: 2352
Number of extensions: 13225
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)