Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_L02
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7DE7 Cluster: PREDICTED: similar to CG10793-PA...    33   7.2  
UniRef50_Q8IJV4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.2  
UniRef50_Q9TZE8 Cluster: Serpentine receptor, class i protein 43...    33   9.5  

>UniRef50_UPI0000DB7DE7 Cluster: PREDICTED: similar to CG10793-PA,
           partial; n=2; Apis mellifera|Rep: PREDICTED: similar to
           CG10793-PA, partial - Apis mellifera
          Length = 387

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = -3

Query: 704 SKEMLTYIFNHILIHSNN*IFIFSYSLVVMNVNENLSDC*TR*RNKMITKINQILECD 531
           S++ +  +F+    HS   IFI     +  NV  NLS+   R R++++TK++ ++  D
Sbjct: 284 SEKYIRVLFDLAYSHSPTIIFIDEIDWIATNVQNNLSEPAKRFRSELLTKLDGLVSTD 341


>UniRef50_Q8IJV4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 517

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 285 FYEINIFRTTFFSLKKTDLYTIK*IYQFNLFFY--KQIFNFDLSTNSEQ 425
           FY+ +IF+ TFF LKK +  T+   Y     +Y  K +F F    N EQ
Sbjct: 53  FYKYDIFKKTFFFLKKENNITLYNCYGVIKIYYSKKYLFYFSTYINVEQ 101


>UniRef50_Q9TZE8 Cluster: Serpentine receptor, class i protein 43;
           n=2; Caenorhabditis elegans|Rep: Serpentine receptor,
           class i protein 43 - Caenorhabditis elegans
          Length = 325

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 467 NYVISTTHLIL---YALVFFVFSKHHIQXXXXXXXXXXXXIVFNSHLNF 604
           NY++ TTHL+L   Y L+F  F++ H              I+FNS + F
Sbjct: 87  NYLLITTHLLLGIQYVLLFLCFARRHQAIAKIKQHHVIPEILFNSFIAF 135


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,381,553
Number of Sequences: 1657284
Number of extensions: 10092665
Number of successful extensions: 16860
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16857
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)