Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_K14
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 48 6e-06
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 47 2e-05
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 46 2e-05
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 45 5e-05
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 44 1e-04
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 44 1e-04
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 42 4e-04
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 42 4e-04
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 41 8e-04
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 41 0.001
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 40 0.003
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 39 0.005
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 38 0.010
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 38 0.010
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 38 0.010
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 31 0.69
02_01_0512 - 3711475-3711600,3711903-3712019,3712099-3712176,371... 29 2.8
10_08_0406 - 17688069-17690643,17691065-17691132 29 3.7
11_01_0560 - 4413174-4414469 29 4.8
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 28 8.5
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 28 8.5
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 685 PPGMAYGAKGSPPVIPPNSTLVFEVEL 605
PP +AYG GSPPVIPPN+TL F+VEL
Sbjct: 160 PPELAYGEDGSPPVIPPNATLQFDVEL 186
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3
Query: 694 IICPPGMAYGA---KGSPPVIPPNSTLVFEVEL 605
+ PP A+G+ + V+PPNST+ +EVEL
Sbjct: 407 VTIPPEYAFGSDETRQDLSVVPPNSTVYYEVEL 439
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPP---NSTLVFEVEL 605
VG KI C P AYGA GSPP IPP ++TL FEVEL
Sbjct: 171 VGEVAKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVEL 209
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 685 PPGMAYGAKGSPPVIPPNSTLVFEVEL 605
PP +AYG GSPP IPPN+TL F+VEL
Sbjct: 126 PPELAYGEAGSPPAIPPNATLRFDVEL 152
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 605
VG RK+ P + YGA+GSPP IP +TL+F+ EL
Sbjct: 198 VGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTEL 233
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 599
VG R++ PP M YG K P IP NSTLVF+VEL N
Sbjct: 557 VGDKRRLTIPPSMGYGNKRMGP-IPQNSTLVFDVELVN 593
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 605
VG RK+ P M YG +GSPP IP +TL+F+ EL
Sbjct: 107 VGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTEL 142
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 593
VGG R++ PP YG +P IP NS LV+EVEL VK
Sbjct: 487 VGGKRRLTIPPAQGYGDVATPK-IPANSWLVYEVELLEVK 525
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -3
Query: 685 PPGMAYGAKGSPPVIPPNSTLVFEVEL 605
PP +AYG GSPP IP ++TL F+VEL
Sbjct: 122 PPDLAYGESGSPPTIPASATLQFDVEL 148
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = -3
Query: 694 IICPPGMAYGAKGSPP---VIPPNSTLVFEVEL 605
+ PP A+G+ S V+PPNST+++EVEL
Sbjct: 358 VTIPPEYAFGSTESKQDLAVVPPNSTVIYEVEL 390
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Frame = -3
Query: 709 GGXRKIICPPGMAYGAKGS------PP--VIPPNSTLVFEVELKNV 596
GG R + PP +AYGA+G+ P VIPPNSTL+F+VE+ V
Sbjct: 170 GGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELK 602
VG KI C P AYG+ GSPP IPP S + + K
Sbjct: 82 VGEVAKITCKPEYAYGSAGSPPEIPPKSVAISPMRCK 118
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
VG RK+ PP M YG+K V P NS++++E+EL V
Sbjct: 358 VGDKRKLTVPPAMCYGSKAIGEV-PKNSSIIYEIELVKV 395
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPP-VIPPNSTLVFEVEL 605
VG +I C P AYGA G P I PNS LVFE+E+
Sbjct: 72 VGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEV 108
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 593
VGG R++ PP + YG G IPPN+ L F++EL VK
Sbjct: 319 VGGIRRLGIPPHLGYGDVGRGN-IPPNAWLNFDIELLKVK 357
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTL 623
VGG R II PP +AYG KG IPPN+T+
Sbjct: 196 VGGQRLIIVPPELAYGKKGVQE-IPPNATI 224
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
VGG R++I PP + YG KG IPP++ ++EL V
Sbjct: 165 VGGKRRVIVPPELGYGKKGMNE-IPPDAPFELDIELLEV 202
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 709 GGXRKIICPPGMAYGAKG-----SPPVIPPNSTLVFEVELKNV 596
GG R+++ PP + +G G + +PP +TL + VE+ V
Sbjct: 205 GGKRRVVVPPALGFGDDGADFGDAAAQVPPGATLEYVVEVDKV 247
>02_01_0512 -
3711475-3711600,3711903-3712019,3712099-3712176,
3712714-3712836,3713125-3713400
Length = 239
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPN 632
VGG R++I PP Y P IPPN
Sbjct: 173 VGGLRRVIIPPSQGYQNTSQEP-IPPN 198
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 410 VILSIKGEKVINHIFFYNFVLLSVTNEIQVAISTSD-WQTYMFHSYNGNQMI 562
++ + G I++++FY VLL +T +AI T + W ++F S+N +M+
Sbjct: 519 IVWTTTGNGPISNVYFYITVLLVLT---VIAIETHEFWTVHVFSSWNIVRMV 567
>11_01_0560 - 4413174-4414469
Length = 431
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 579 KTSVHLTFFNSTSNTKVELGGITGGEPFAPYAMPGG 686
K +V F S++ + ELGG+ GG + ++PGG
Sbjct: 79 KGAVERVAFGSSAAVESELGGVGGGGAGSEVSVPGG 114
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 682 PGMAYGAKGSPPVIPPNSTLVF 617
PG +GA GSP +PP+ VF
Sbjct: 150 PGWGHGATGSPLPVPPSPGTVF 171
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = -3
Query: 706 GXRKIIC-PPGMAYGAKGSPPVIP----PNSTLVFEVEL 605
G R I PP +A GSP IP P TL FE+EL
Sbjct: 4 GERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIEL 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,666,849
Number of Sequences: 37544
Number of extensions: 294979
Number of successful extensions: 570
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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