Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_K14
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...    44   8e-05
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    44   8e-05
U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.     43   3e-04
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...    43   3e-04
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    38   0.005
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    36   0.038

>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = -3

Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
           VG  R +  PP + YG +G+PP IP NS L F+VEL  +
Sbjct: 94  VGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKI 132


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = -3

Query: 709 GGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
           G  RK++ PP +AYG  G PP IP NS L F++ L+ +
Sbjct: 216 GEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253


>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = -3

Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
           VG   K+     + YG +G PP IP N+TLVFEVEL  V
Sbjct: 69  VGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = -3

Query: 712 VGGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
           VG   K+     + YG +G PP IP N+TLVFEVEL  V
Sbjct: 69  VGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 709 GGXRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 596
           G  R+++ P    YG++GSPP IP  + L FE+ L+ +
Sbjct: 216 GERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -3

Query: 670 YGAKGSPPVIPPNSTLVFEVEL 605
           YG  GSPP IP  +TL+FEVEL
Sbjct: 96  YGDAGSPPKIPGGATLIFEVEL 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,345,639
Number of Sequences: 27780
Number of extensions: 299270
Number of successful extensions: 630
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)