Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_K10
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF286471-1|AAG00550.1|  316|Homo sapiens retinitis pigmentosa GT...    31   5.0  
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch...    30   6.6  
AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.              30   6.6  
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.     30   6.6  

>AF286471-1|AAG00550.1|  316|Homo sapiens retinitis pigmentosa
           GTPase regulator protein.
          Length = 316

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
 Frame = -3

Query: 647 SLVSDNLETSTENNEDFPKFDEVADVDVIIE---ESVGEPNDITQIQDDSS---LDYFPE 486
           +L    + T +E N+DF K  E    DVI +   ESV +P+   +   +S     D F +
Sbjct: 150 NLPDRGMNTESEENKDFVKKRESCKQDVIFDSERESVEKPDSYMEGASESQQGIADGFQQ 209

Query: 485 IDDSYRFASVDKVEDEI 435
             ++  F+S +K +DE+
Sbjct: 210 -PEAIEFSSGEKEDDEV 225


>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
            protein.
          Length = 4024

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 300  IWVKVLEVSVRIPSWRESSACHVTSSWLLPSPKNCE 407
            I +K+LE +V+  +W     CH+ +SW+    K CE
Sbjct: 3470 IAMKMLEKAVKEGTWVVLQNCHLATSWMPTLEKVCE 3505


>AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.
          Length = 2536

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 300  IWVKVLEVSVRIPSWRESSACHVTSSWLLPSPKNCE 407
            I +K+LE +V+  +W     CH+ +SW+    K CE
Sbjct: 2195 IAMKMLEKAVKEGTWVVLQNCHLATSWMPTLEKVCE 2230


>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
          Length = 4031

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 300  IWVKVLEVSVRIPSWRESSACHVTSSWLLPSPKNCE 407
            I +K+LE +V+  +W     CH+ +SW+    K CE
Sbjct: 3477 IAMKMLEKAVKEGTWVVLQNCHLATSWMPTLEKVCE 3512


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,908,213
Number of Sequences: 237096
Number of extensions: 1752206
Number of successful extensions: 3584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3575
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)