Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_K10
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    26   0.38 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   4.7  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   6.2  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 338 WNPYRNFQYFYPYYGFYRPSSFRY 267
           W    NF YF P YG Y  + F +
Sbjct: 210 WRITHNFFYFDPRYGNYNINGFNF 233


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 339 SWRESSACHVTSSWLLPSP 395
           SW ++ +  +T S+ +P P
Sbjct: 221 SWEQNRSWRITHSYFMPDP 239


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 172 NAFEVSKHYVYKNNT 216
           N F+VSK  VY N+T
Sbjct: 70  NVFDVSKFDVYLNDT 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,224
Number of Sequences: 438
Number of extensions: 3520
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)